Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq633 277 2e-69 seq520 116 4e-21 seq247 109 5e-19 seq426 91.5 1e-13 >seq633 Length=11014 Score = 277 bits (306), Expect = 2e-69 Identities = 654/976 (67%), Gaps = 30/976 (3%) Strand=Plus/Plus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 ||||| || || || |||||||| || || || ||||||| || |||| | |||||| Sbjct 5089 GCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATGATCTCC 5148 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | |||||| || | ||| |||| ||||| || ||| |||| ||||||| Sbjct 5149 GTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGGTTGCAC 5208 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG---AAC 148997 ||||| ||| |||||||||| || ||| ||||| || |||| ||| | || ||| Sbjct 5209 GCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATCGCAAAC 5268 Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT-CCTGCT----CGTATA 149052 | | | || |||||| |||| || || | | | | || ||| |||| Sbjct 5269 CAAAGGAG---CTGCGC-----CTTGATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTACG 5320 Query 149053 AAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112 || ||| | ||||||||||| || ||||||| |||| |||||||||| || || Sbjct 5321 CCGTGTACTTCTCTTCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCG 5380 Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172 ||||||| |||| ||| |||||| | | ||| | || ||| ||||| ||| || Sbjct 5381 GGCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCC 5440 Query 149173 AGAGCGCGTACATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGG 149231 | || |||| | ||||||||||| | || ||||| ||| ||| | || Sbjct 5441 ACAGGCCGTAGAAAAGGTCGCGCGCGCGCGC-TTCTTCCTTGCCGTGGTTCTTCCTCAAA 5499 Query 149232 TTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTG 149291 | |||| | ||| ||||| ||||||||| |||| ||| | ||| | |||||||||| Sbjct 5500 TCGAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTG 5559 Query 149292 CGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGT 149348 |||||| ||||| ||||| |||| ||| | ||| ||| ||||| || | ||| || Sbjct 5560 CGCTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGG 5619 Query 149349 TCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTT 149406 | ||||| | | |||||||| || || ||| |||| || | || |||| | | Sbjct 5620 ACGATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGAC-GCGGTGC-CTCGGATGT 5677 Query 149407 TGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 ||| | | | ||||| |||||| || ||||||||||| |||||| || || | Sbjct 5678 CGTGGATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGG 5737 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | |||||| ||||||||| ||| |||||||| | ||| |||||||| | | | Sbjct 5738 TGTCGTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCT 5797 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 |||| |||| ||| ||||| ||||| ||||| || | | || || Sbjct 5798 GCGGGCGGGGCGTACCGCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTCGC 5857 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 | | ||| | ||||| |||| || |||| |||| |||||||| |||| || Sbjct 5858 TGAGCATGTGGTACGTATCGATGGCGTTCTCCA---CATCCTTGTGGATGCCGATGGAGA 5914 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 ||||||| |||| ||||| || || ||| | | |||| ||| |||| ||| Sbjct 5915 CGCGCATGAGCAGGTGCTGGGGCCGTTCCACGATTTTGCCGTCAAGGCGCAGCAGGTACG 5974 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766 | || || || ||||| || ||||| | ||| || ||||||||| ||| |||| Sbjct 5975 ACCTCTCCAGGGTTTTGTACCCGAAGTAGTCGTAATCGAAGTCGCGGTCGTACACAATCT 6034 Query 149767 CGGCGTCGATCAGCGC 149782 ||| ||||| ||||| Sbjct 6035 CGGAGTCGA--AGCGC 6048 Score = 96.9 bits (106), Expect = 3e-15 Identities = 519/819 (63%), Gaps = 34/819 (4%) Strand=Plus/Plus Query 147953 GCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGACGA 148012 |||||| |||||||| |||||||| || ||| | ||| |||||| ||||| |||| Sbjct 4146 GCGCAGGTAGTACATCCCCGTCTTCAGCCCCTTCTTCCAGGCGTAGAAGTGCAGGGACG- 4204 Query 148013 CATGAGCGTGTACG---TCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCAAT 148069 ||||| | || ||| || || || || || || |||||||| ||||| || Sbjct 4205 --TGAGCTTCCCCGCGTTCGCGTCCGACATGTGCACGTTGAAGGACTGGCTTTGGTCGAT 4262 Query 148070 GAACGCGCCACGGTCAGCGGCCATTTCAATGAG-TCGCTTTATCTTCATCTCCCAGGCCG 148128 ||||||||| ||||| |||||||| || | || ||| | ||| || ||||| | | Sbjct 4263 GAACGCGCCTCGGTCGGCGGCCATGTCCACAAGCACGCGCT-GCTTGATTTCCCACACGG 4321 Query 148129 TCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGGT 148188 | ||||| | | ||||| | ||||| || ||| | || ||||| |||| || Sbjct 4322 TTTTGTAAATCGCCTTGAGTTCCTCGGGGAT---GTCCAGGCCTTGCACGCTGCCGTTGT 4378 Query 148189 --GCGCAAAAATC-TGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCAT 148245 | | | || | ||| | |||| | | || || ||| || Sbjct 4379 TGGAGATGAGGTCGTTCTTGAGTGAGGGGTCC---CACAACCCTAGTTCCGTCAAATCCG 4435 Query 148246 CGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGT 148305 | || | | |||||||| ||||| |||| ||||| || | || | || Sbjct 4436 AAAGAAGGTGGTTGTTCACCACGGTGAACTCTCCGGAAAGCACCCGTCTGGCGTAGATGT 4495 Query 148306 TGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGG 148365 |||| || | ||||| || ||||||||||||||| || |||| |||| || |||| Sbjct 4496 TGCTGGTGTAGGGTTCGAAGCACTCGTTGTTGCCCAGGATTTGCGACGTCGACGCGGTGG 4555 Query 148366 GCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGA 148424 ||||| || || || |||||||| |||| |||| || |||| || |||| Sbjct 4556 GCATGGGAGCCACGAGAAGCGAGTTCCGCACGCCGCTCGCCGCGATCTTTGAGC-GCAGA 4614 Query 148425 GCCGCCCA---------GTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGC 148475 | |||| ||||| | ||| | || ||| |||||| || |||| Sbjct 4615 CCGACCCAGTCGTGCCTGTCCCCGCCGGGCATCACCGTGACGCCCCACATTTCAGGCTGC 4674 Query 148476 AGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCC 148535 || ||||| | | | || || |||||| ||||| |||| | || |||| Sbjct 4675 AGGATGCCCTTGGAAACAGGCGACCCGGCGTACGTTTCGTACGTCCCGTCCACCACCGCT 4734 Query 148536 AGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAG- 148594 | || | || |||||| || |||| ||||| ||| ||| | | |||||| Sbjct 4735 ATGGCGTTGGATTCCGTCAGCGCGGCGAAGTAGATCGTTTCGAAAATCTCCGCGTTGAGT 4794 Query 148595 --CAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 | |||| | | | ||| | | || | ||| | | ||| | || || ||| Sbjct 4795 TTCTGCGCTTCGG---GGGAATCGAAGGCCAGGCCGAGCAGGATGAACACATCCGCGAGG 4851 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC 148712 ||||| ||||| | ||| ||||| ||||| ||||| || | |||||| |||| | Sbjct 4852 CCCTGGACGCCGAGGCCGATGGGGCGGTGCCGCATGTTCGAACGCCGCGCGGTCTCCACT 4911 Query 148713 GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGC 148751 || |||| ||| |||||||||| ||| || |||||| Sbjct 4912 GGGTAGTAGTTCACGTCGATGATCCTGTTCAGGTTGCGC 4950 >seq520 Length=32656 Score = 116 bits (128), Expect = 4e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| || |||||||| | | ||| |||||| ||||||||||| Sbjct 23596 GGTGGATTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCC 23655 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| |||||||||||||| || |||||||||||||| |||||| ||| Sbjct 23656 CGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTT 23715 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||| | | |||||| || | ||||| ||| || || || Sbjct 23716 GACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTACCCGT 23769 >seq247 Length=13427 Score = 109 bits (120), Expect = 5e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || |||||||| | | |||| | | | ||||| ||||||||||| Sbjct 6225 GTGGATTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCAAGCTGCTTGCC 6167 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| ||||||| ||||||||||| || ||||| || |||||||| ||| || ||| Sbjct 6166 CGCGAAAATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATTTTCGCCTT 6107 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | ||||| | | |||||| |||| ||||| ||| || || || Sbjct 6106 CACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGT 6053 >seq426 Length=55785 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 116472 GCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGA 116531 |||||| |||||| | |||||||| || ||||||| |||||| |||| ||| | ||| Sbjct 5089 GCACGGGTTCCACATCCACGAGTTCGGGGACACCACCAACGGGTGCATGTCCACGGGCCC 5030 Query 116532 ACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGG 116591 ||||||||||| | ||| || | || || |||||| | || | || |||| ||| Sbjct 5029 GCACTTCAACCCGAATGGCAAGAAGCATGGGTCGCCCACCAACGAGGAGCGCCACGCCGG 4970 Query 116592 TGACCTGGGCAACAT 116606 |||||||| ||||| Sbjct 4969 CGACCTGGGGAACAT 4955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414340289560