Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq633 174 1e-38 seq426 82.4 7e-11 >seq633 Length=11014 Score = 174 bits (192), Expect = 1e-38 Identities = 616/951 (65%), Gaps = 26/951 (3%) Strand=Plus/Plus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTC 147518 ||||| ||||| || ||||| || || || || || || | || || ||| | ||| || Sbjct 5089 GCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACG-TGAACTCGATGATCTC 5147 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||||||||| | || |||| || ||||| ||| ||| || ||||| Sbjct 5148 CGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGGTTGCA 5207 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAA 147635 |||||||||||| |||||||| || |||||| || ||||||| ||| | || ||| Sbjct 5208 CGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATCGCAAA 5267 Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCG---GCCCTCGTTTTCGTACCG 147692 || | | || |||||| | || | | || |||| | ||||||||| Sbjct 5268 CCAAAGGAG---CTGCGCCTTGATGGTCTTC---TTGCCTTTGCCCGCTTTTTCGTACGC 5321 Query 147693 CTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGG 147752 | |||| | || ||| | || || ||||||| || || ||||| |||| | ||| Sbjct 5322 CGTGTACTTCTCTTCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCGG 5381 Query 147753 ACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812 |||||||||| ||| | ||| | | || | |||| ||||| || ||| Sbjct 5382 GCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCCA 5441 Query 147813 CAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT 147872 ||| |||| | ||| |||||||| || || ||| ||| |||||| Sbjct 5442 CAGGCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAATC 5501 Query 147873 AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACG 147932 ||| | |||||||| |||||| ||||||| ||||| || | ||| || || || Sbjct 5502 GAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTGCG 5561 Query 147933 CTTTCC---GCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTC 147989 ||| || ||| ||||| || | ||| | ||| ||| |||||||||| |||||| | Sbjct 5562 CTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGGAC 5621 Query 147990 CAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGG--CTCGCACTTCG 148047 | |||| | | |||||||| ||| ||| | | ||||| |||| | ||| Sbjct 5622 GATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTAC--GACGCGGTGCCTCGGATGTCG 5679 Query 148048 TGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTC 148107 || | | | || || |||||| || ||||||| ||| ||||| || || || Sbjct 5680 TGGATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGGTG 5739 Query 148108 GTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGC 148167 |||||| || |||||| ||| | || | | | | || || ||||| | | ||| Sbjct 5740 TCGTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCTGC 5799 Query 148168 GGAATCCGCGTTCCCGCCGA-GAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 || |||| || || | ||| || ||||| ||||||||| | | | | || Sbjct 5800 GGGCGGGGCGTACC-GCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTCGCT 5858 Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286 | |||| | ||||| || || |||| || | || | | || ||||| | | ||| Sbjct 5859 GAGCATGTGGTACGTATCGATGGCGTTCTCCACATCCTTG---TGGATGCCGATGGAGAC 5915 Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCC 148346 ||||||||||| |||||| || ||||| | | || || | || || || Sbjct 5916 GCGCATGAGCAGGTGCTGGGGCCGTTCCACGATTTTGCCGTCAAGGCGCAGCAGGTACGA 5975 Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 | || ||||||||||| || ||||| | |||||| || || | ||||| Sbjct 5976 CCTCTCCAGGGTTTTGTACCCGAAGTAGTCGTAATCGAAGTCGCGGTCGTA 6026 >seq426 Length=55785 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/135 (75%), Gaps = 6/135 (4%) Strand=Plus/Plus Query 51741 TTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCG-GAGCG--CCGTGGTCGCTGCCG 51797 || |||| ||||||| |||||||| || |||| | | ||| || || | |||| Sbjct 4958 TTCCCCAGGTCGCCGGCGTGGCGCT---CCTCGTTGGTGGGCGACCCATGCTTCTTGCCA 5014 Query 51798 GTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGC 51857 | ||||||||||| ||||| ||| |||| |||||| ||||||| ||||| ||||| Sbjct 5015 TTCGGGTTGAAGTGCGGGCCCGTGGACATGCACCCGTTGGTGGTGTCCCCGAACTCGTGG 5074 Query 51858 ACGTGGAATCCGTGC 51872 | |||||| |||||| Sbjct 5075 ATGTGGAACCCGTGC 5089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604831282840