Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq520 102 7e-17 seq247 84.2 2e-11 >seq520 Length=32656 Score = 102 bits (112), Expect = 7e-17 Identities = 125/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| || | ||| || |||| || |||||||| ||||| || Sbjct 23603 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAG 23662 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | |||| || ||||||||| |||||| ||| | ||| Sbjct 23663 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 23721 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | ||||| || |||||||||| ||||| || |||||||| Sbjct 23722 GTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTACCCGT 23769 >seq247 Length=13427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| || | || || | || || |||||||| ||||| || Sbjct 6219 TCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAA 6160 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | || | | |||||||||| ||| || ||||| ||| Sbjct 6159 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 6101 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | ||||| || |||||||| | ||||| || |||||||| Sbjct 6100 GTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGT 6053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787576270520