Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq520 120 3e-22 seq247 105 7e-18 seq648 104 2e-17 seq633 82.4 8e-11 >seq520 Length=32656 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || ||||||||||| || |||||||| || | | |||| | Sbjct 23576 AGGCGCAGGACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGG 23635 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || || || | ||||||||| ||||| || |||||||| Sbjct 23636 CCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCC 23695 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || ||||| || || || Sbjct 23696 TTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGGGTG 23755 Query 134676 ATGGTTTTACCGGT 134689 ||||| ||||| || Sbjct 23756 ATGGTCTTACCCGT 23769 >seq247 Length=13427 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| ||||| |||||||||||||| || |||||||| || | Sbjct 6255 CCTCCGCGCAGGCGGAGCACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCG 6196 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || ||||| | |||||||| || || || Sbjct 6195 AGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGGG 6136 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || ||||| || || ||| | ||||| || || ||||| Sbjct 6135 ATACCCTCCTTGTCCTGGATTTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACC 6076 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| ||||| || Sbjct 6075 TCGAGGGTGATGGTCTTACCCGT 6053 >seq648 Length=41169 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGT 134562 ||| |||| |||||||||||| | || |||||||||| ||||||| ||| | ||| | Sbjct 13552 CACCAGGTCGAGCGTGGATTCCATCTGGATGTTGTAGTCCGCCAAC-GTGCGGACGTCTT 13494 Query 134563 CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622 ||||||| |||| | || || | |||||| || |||| |||| |||||| | || | Sbjct 13493 CGAGCTGCCTGCCCACGAAGATGAGACGCTGGTG-GCGGGGGGTAAGCCTTCCCTGTCCT 13435 Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682 | || || || || ||| | ||||| || || || || || || || ||||| | Sbjct 13434 GGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCAACCTCCAGGGTGATGGTCT 13375 Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 | || || || || || ||||| || ||||||| Sbjct 13374 TGCCAGTCAACGTCTTCACGAAGATCTGCATTT 13342 >seq633 Length=11014 Score = 82.4 bits (90), Expect = 8e-11 Identities = 223/334 (67%), Gaps = 13/334 (4%) Strand=Plus/Minus Query 7657 ACGCACGCTTCGCCCACCATGTTTGCC-GCGG---GCACAAACGCGCCTCAATTGTCCTC 7712 |||||||| |||||||| |||| | |||| || | ||| || || | || || Sbjct 5843 ACGCACGCGTCGCCCACGCTGTTCAACAGCGGTACGCCC---CGC-CCGCAGCTCTCGTC 5788 Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772 ||| || || | ||||| || ||| |||||| || || ||| |||| ||| || Sbjct 5787 GTGCTTCCTGATCGCCATGAAGGAGGACTCCATCGAGGGTATCTACGACACCCTGAAGGA 5728 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832 ||||| || || || | || |||||| || |||||| | | ||||| | || | Sbjct 5727 GTGCGCGTGCATCTCAAAGTCCGCCGGCGGTATCGGTCTGTCCATCCACGACATCCGAGG 5668 Query 7833 CAACG-GTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGC 7891 || || || | |||| ||| ||||| | | | ||| | | |||||| ||| Sbjct 5667 CACCGCGTCGTA-CATCCGCGGCACAAACGGCACCTCAAACGGCATCGTCCCCATGCTGC 5609 Query 7892 GCGTGTTCAATAACGCGGTGCGACATGTAGACCA---GGGGGGAAAGCGCAAAGGCGCCG 7948 |||||||||| || | | ||| | || ||||| ||||| |||||||| ||||| Sbjct 5608 GCGTGTTCAACGACACCGCGCGGTACGTGGACCAAGGCGGGGGCAAGCGCAAGGGCGCGT 5549 Query 7949 CTGCCATCTATTTGGAGCCGTGGCACGCGGACAT 7982 ||| ||||| | || ||||||||| ||||| Sbjct 5548 TTGCGATCTACCTTGAACCGTGGCACAGCGACAT 5515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391646613880