Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq633 150 2e-31 seq462 96.9 4e-15 seq564 93.3 5e-14 seq189 89.7 6e-13 seq151 86.0 8e-12 seq382 82.4 1e-10 >seq633 Length=11014 Score = 150 bits (166), Expect = 2e-31 Identities = 620/965 (64%), Gaps = 22/965 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || ||||| || || | ||||| || || || || ||| ||| |||| | Sbjct 5083 GGGAGCGCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATG 5142 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || | |||||| |||| |||| ||||| || | Sbjct 5143 ATCTCCGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGG 5202 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 |||||||| || ||| | ||||||||||| | || || || || |||| |||||| Sbjct 5203 TTGCACGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATC 5262 Query 111410 GCCTTCCAAAC-ATCGGCGGCTGGTACAATGGCGTTG--GCCCGT-CCCTCCGCCTCGTA 111465 || ||||| | | ||| || | |||| || ||| | ||| | ||||| Sbjct 5263 GCAAACCAAAGGAGCTGCGCCTTG----ATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTA 5318 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGT 111524 | ||||| |||| ||| |||||||| | || || | ||| || || || || Sbjct 5319 CGCCGTGTACTTCTCTTCGAACGCCTCACCC-CAGCAATCCGCGAGCCCGGGGCACTCGT 5377 Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTC--TGG 111582 || || | || | ||||| || | ||| |||| || |||||| ||||| ||| Sbjct 5378 TCGGGCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGG 5437 Query 111583 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 111642 |||||||| | || || || | || || ||||| | || ||||| | Sbjct 5438 --TCCACAGGCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCT 5495 Query 111643 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 111702 || || || | || | ||| || |||||| || ||||| |||| || | | || Sbjct 5496 CAAATCGAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCC 5555 Query 111703 CTTTCGA---CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 ||| || | ||| |||| | || || ||||| ||| |||| || ||||| ||||| Sbjct 5556 CTTGCGCTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCAT 5615 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 || | || || | ||| || ||||| || || || || || ||| | Sbjct 5616 GGGGACGATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGACGCGGTGCCTCGGAT 5675 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 || |||||| || || ||||| || || |||||||||| ||| |||||| | || Sbjct 5676 GTCGTGGATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAG 5735 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || | |||||||| | ||| ||||||||||| ||||||| |||||||| || | Sbjct 5736 GGTGTCGTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAG 5795 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999 |||||| | || ||||| ||||| || || || | ||||| | | | | | Sbjct 5796 CTGCGGGCGGGGCGTACCGCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTC 5855 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 | | | ||| ||| || || | | | || | | ||| |||||||||||| | Sbjct 5856 GCTGAGCATGTGGTACGTATCGATGGCGTTCTCCA---CATCCTTGTGGATGCCGATGGA 5912 Query 112060 GACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA 112119 ||| ||||||| || || ||| || ||||| || |||| || || || | || || Sbjct 5913 GACGCGCATGAGCAGGTGCTGGGGCCGTTCCACGATTTTGCCGTCAAGGCGCAGCAGGTA 5972 Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCGCTTCGTA-TCAA 112178 | |||| ||||||||| || ||||| | |||| |||| || ||||| ||| Sbjct 5973 CGACCTCTCCAGGGTTTTGTACCCGAAGTAGTCGTAATCGAAGTCGCG-GTCGTACACAA 6031 Query 112179 TATCG 112183 | ||| Sbjct 6032 TCTCG 6036 >seq462 Length=35084 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 170054 TGGGTCATAATCAAGGACATTGTTTATGACCTCACAAAATTCCTTCCAGATCACCCCGGT 170113 |||||| | ||| ||| || || || |||||||| || ||||| || ||||| || Sbjct 5679 TGGGTCGTGATCGAGGGCAAGGTGTACGACCTCACCGCGTTTCTTCCCGACCACCCGGGG 5738 Query 170114 GGTAAGAAGGCGATCATGCTCTTTGCTGGCAAAGATGCAACTGAAGAGTTTGATATGCTT 170173 ||||| ||||| |||||| | || || || ||||| || || || || || | ||| | Sbjct 5739 GGTAAAAAGGCCATCATGTTGTTCGCAGGGAAAGACGCGACCGAGGAATTCAACATGTTG 5798 Query 170174 CATCCCCCGAATGTTCTTAAAAAGTACCTGTCACCAGA 170211 || || ||||| || | || |||||||||||||| || Sbjct 5799 CACCCGCCGAACGTGTTGAAGAAGTACCTGTCACCCGA 5836 >seq564 Length=17261 Score = 93.3 bits (102), Expect = 5e-14 Identities = 230/340 (68%), Gaps = 18/340 (5%) Strand=Plus/Minus Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 |||||| || |||| ||||| || |||||| ||| |||||| || | ||| || Sbjct 9444 GATCCGCGACGAACTCGATGTAGTCCGACATCAGCTCTTTGTTCATGCCCACCAGGG-AC 9386 Query 122549 ATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG-GC 122606 | ||| |||||||| | | |||| |||| |||||||| || || || ||||||| || Sbjct 9385 ACGGGCAGTGCGTCGCACAGGAACTCTTTTTCAATCTCCACGGCTTCCATCACGATCTGC 9326 Query 122607 GT------GGATAGTTTCGGTA-GTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 122659 | || | | |||| || | || | || || | | || || |||| Sbjct 9325 TTCACCACGGCGACGTCCGGTTTGTTGTTCAAGTA-GC----TGTACAACAGG--CACGC 9273 Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719 ||| || |||| || || || || ||| || || || || || || || || | Sbjct 9272 GAAA-TCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAAACGTCAGCCCGG 9214 Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATAC 122779 |||| | || ||||| |||| ||| || || |||||| |||||||||||||| | || Sbjct 9213 GCATCAACCCGCGCTTTTTCAGCCAGTAGATGCTGCAGAACGACCCGGAGAAGAAAACAC 9154 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 |||| | ||||| ||||| | || || ||||||||||| Sbjct 9153 CCTCGATGCACGCGAACGCGATGAGTCGCTCGGCGAAGGA 9114 >seq189 Length=62474 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 191560 TGGGATCCAGACGATCAGCGTCGTATTAACGAAAATAAAAATTGGAGA-GCTGGTGACCC 191618 ||||| || ||||| ||||| | ||| ||||||| ||| | ||| || || | ||||| Sbjct 58718 TGGGACCCGGACGAACAGCGCAGGATTGACGAAAACAAACAATGGCGACGCACG-GACCC 58660 Query 191619 CGAAGAAGATGCGTGGGATATAGACAAAGAGCGTGACGCAGCGAGATACAAACGGGAATC 191678 | |||||||||||||| || |||||||| || || || | || |||||||| || || Sbjct 58659 TGCTGAAGATGCGTGGGACATCGACAAAGAACGCGATGCGGTGATGTACAAACGCGAGTC 58600 Query 191679 GTTGGA 191684 |||||| Sbjct 58599 GTTGGA 58594 >seq151 Length=22738 Score = 86.0 bits (94), Expect = 8e-12 Identities = 191/284 (67%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596 ||||| || ||||||||||| | | || || || |||||||| | ||| || || | Sbjct 2086 TCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTCCCGCTCGTCGTTCCC- 2028 Query 11597 GGCATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAA 11654 || ||| ||||| | ||||||| || ||||| || ||||| |||||||| || | Sbjct 2027 -GCCGCCCATCCCAGCCCCGCGTTGCCGCCCAACCGCGTCGATCTCGTCAATGAACACGA 1969 Query 11655 TACATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCC 11710 | || || ||| |||||| |||| || | ||||||||| | || || Sbjct 1968 TGCAAGGCGCCTTGGATTTCGCCT----TTTCGAACAAATCGCGAACACGCGACGCCCCG 1913 Query 11711 ACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGAT 11770 || || || ||||||||||| || | | ||| | ||| || || || || | | Sbjct 1912 ACCCCGACGAACATCTCCACGAACTCGGAGGCGGCGCATGAGAAAAACGGCACGCCCGCT 1853 Query 11771 TCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||||| | |||| |||||| | ||||| || || || || Sbjct 1852 TCGCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGG 1809 >seq382 Length=14395 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 120423 AAACTTGTTGTCAATGAACCAAATGGAACTGACATCAACAATAGCCATAGCCTTTTGTCC 120482 ||||||||| |||| ||||||||| | ||||||||| ||||| | |||||||||||| Sbjct 3885 AAACTTGTTATCAAAGAACCAAATTTGATTGACATCAATGATAGCTAGAGCCTTTTGTCC 3944 Query 120483 CTTCTCAACACTGTCAAGAG 120502 |||||| | ||| || |||| Sbjct 3945 CTTCTCGATACTATCGAGAG 3964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023607922400