Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq633 205 1e-47 seq151 138 1e-27 seq564 109 7e-19 seq290 87.8 2e-12 seq382 86.0 8e-12 seq19 86.0 8e-12 >seq633 Length=11014 Score = 205 bits (226), Expect = 1e-47 Identities = 615/943 (65%), Gaps = 10/943 (1%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || ||||| ||||| || || ||||| | ||| || ||| ||| |||| || Sbjct 5083 GGGAGCGCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATG 5142 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || |||||||||| ||| || | ||| || |||| ||||| || || || || | Sbjct 5143 ATCTCCGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGG 5202 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || ||||| || ||| | |||||||| || | || || || ||| || | |||||| Sbjct 5203 TTGCACGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATC 5262 Query 118884 GCCTTCCAGAC-ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || ||| | | | || || | | || ||| || ||| ||| |||||| Sbjct 5263 GCAAACCAAAGGAGCTGCGCCTTG-ATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTACGC 5321 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 ||||| |||| ||| | |||||| | || | |||||| || || | || Sbjct 5322 CGTGTACTTCTCTTCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCGG 5381 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||| | || | ||||| || ||| |||| || |||||| ||||| | |||| Sbjct 5382 GCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCCA 5441 Query 119063 GAGCGCCG-AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 || |||| |||| || || || ||| |||||||| | || || || | ||| | Sbjct 5442 CAG-GCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAAT 5500 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 | | |||| | ||| || |||||||||||| ||||| | ||| | | ||||| | Sbjct 5501 CGAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTGC 5560 Query 119182 G---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | | || | |||| || |||| ||| ||| |||| || || || ||||| || | Sbjct 5561 GCTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGGA 5620 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 ||| || | || ||| ||||| || || || ||| || ||| || |||| Sbjct 5621 CGATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGACGCGGTGCCTCGGATGTCGT 5680 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 ||||| || ||| ||||| || || |||||||||| |||||||||| | || || Sbjct 5681 GGATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGGTGT 5740 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 ||||||| || ||||| ||||| |||| | ||||| |||||||| ||| | || | Sbjct 5741 CGTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCTGCG 5800 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACA 119478 | | ||| ||||| |||||| || || || | |||||| | | | | | | | Sbjct 5801 GGCGGGGCGTACCGCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTCGCTGA 5860 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | ||| ||| || || || |||| | ||| ||| || ||||| ||||| | Sbjct 5861 GCATGTGGTACGTATC---GATGGCGTTCTCCACATCCTTGTGGATGCCGATGGAGACGC 5917 Query 119539 GCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCT 119598 |||| | || || ||||| ||||| | | || || || | | | ||||| | Sbjct 5918 GCATGAGCAGGTGCTGGGGCCGTTCCACGATTTTGCCGTCAAGGCGCAGCAGGTACGACC 5977 Query 119599 TCTCCAAGGTCTTGAGACCAAAATAGCCAAAATCGTAGTCCCG 119641 |||||| ||| ||| || || ||| | ||||| |||| || Sbjct 5978 TCTCCAGGGTTTTGTACCCGAAGTAGTCGTAATCGAAGTCGCG 6020 Score = 118 bits (130), Expect = 1e-21 Identities = 304/463 (66%), Gaps = 19/463 (4%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| || || |||||||| ||||| |||| |||||| | || || Sbjct 4489 TAGATGTTGCTGGTGTAGGGTTCGAAGCACTCGTTGTTGCCCAGGATTTGCGACGTCGAC 4548 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| |||| |||||| ||| || | || | || ||| || Sbjct 4549 GCGGTGGGCATGGGAGCCACGAGAAGCGAGTTCCGCACGCCGCTCGCC-----GCGATCT 4603 Query 118302 TTGAGAGC-----GTCCCAGTCGTAGTTGA----GCTTTGTCTCCCCCTG-----CCACA 118347 ||||| || | ||||||||| || || | || || || ||||| Sbjct 4604 TTGAGCGCAGACCGACCCAGTCGTGCCTGTCCCCGCCGGGCATCACCGTGACGCCCCACA 4663 Query 118348 TATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCT 118407 | ||| ||| ||||| || | ||| | ||||| || | | || || || | || | Sbjct 4664 TTTCAGGCTGCAGGATGCCCTTGGAAACAGGCGACCCGGCGTACGTTTCGTACGTCCCGT 4723 Query 118408 CAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGC 118467 | ||| |||| | || | || || || ||| || || ||||| ||||| Sbjct 4724 CCACCACCGCTATGGCGTTGGATTCCGTCAGCGCGGCGAAGTAGATCGTTTCGAAAATCT 4783 Query 118468 GAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACAT 118527 || || | | || || ||| |||||| || || || | | || || || |||| Sbjct 4784 CCGCGTTGAGTTTCTGCGCTTCGGGGGAATCGAAGGCCAGGCCGAGCAGGATGAACACAT 4843 Query 118528 CCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGG 118587 ||||||| || ||||| |||||||| || ||||| || | ||| || || ||| |||| Sbjct 4844 CCGCGAGGCCCTGGACGCCGAGGCCGATGGGGCGGTGCCGCATGTTCGAACGCCGCGCGG 4903 Query 118588 TCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 ||||||| || || | ||| ||||| | ||| || || || Sbjct 4904 TCTCCACTGGGTAGTAGTTCACGTCGATGATCCTGTTCAGGTT 4946 >seq151 Length=22738 Score = 138 bits (152), Expect = 1e-27 Identities = 507/780 (65%), Gaps = 33/780 (4%) Strand=Plus/Minus Query 13666 GAAGAATGTCACACCACCCGCGTCCCCTCGCGGAATGATTGAAACCTTTCGAACTGTGTC 13725 |||||| |||| || ||||||| ||||| || | ||| || | ||| ||| | ||| Sbjct 2573 GAAGAAGGTCAGTCCCCCCGCGTTGCCTCGAGGCACGATGGAGATCTTCGTAACCGGGTC 2514 Query 13726 GTACCCAGGTAAAGTAGCGCCGACGATGGCGTGCCCAGCTTCGTGATACGCCACGA---G 13782 |||| | || | |||||||| ||||||||||| |||||||| ||||| || | | Sbjct 2513 GTACTCGGGCATGAGCGCGCCGACAATGGCGTGCCCGGCTTCGTGGTACGCGACCAAACG 2454 Query 13783 TTCCTTCTTTCGTGGTGAGAACTTGGTGTCACCCTTGGCA---CCCACGATGATGCGTTG 13839 || ||||| | | | | || | | | |||| ||| ||| | | |||||| | Sbjct 2453 TTTCTTCTGCAG-GCTCATCACC--GCGCCTTCCTTCGCAGCACCCGCAACGATGCGCTC 2397 Query 13840 ATACACATTCTCAACGATATCATTCGTGATCGTTCCGTCG----CCGTCACGGACAGCGC 13895 | | | | | | || || ||||| ||||| ||| | || ||||| Sbjct 2396 CAAGGCGTCCGCGATCTCCTCCTTACTGATC--TCCGTGAGCTCCCGCCTCG--CAGCGA 2341 Query 13896 GGATGGCACACTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCT 13955 ||||||| || ||||| |||||| || |||| || || ||||| | ||| || Sbjct 2340 GGATGGCGGCTTCGTTGAGAAGGTTCTGCAGCGCGGCGCCGGAAAAGCCGGGCGTGCGCC 2281 Query 13956 TTGCGATGGCGT-GTAGCTTCACATCGTCAGCCAACTTCTTGTCTCGGGCGTGGACACCC 14014 |||| || ||| | ||| || | | | |||| |||| ||||| || | Sbjct 2280 GCGCGACCTTGTCGTAA-TCCACGTCCTTGCCGATGGTCTTCCCTCGCGCGTGCACTTTC 2222 Query 14015 AAAATCTTC-TCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCG 14073 | ||| | || | ||||| || ||| ||| |||||||| || || || || || Sbjct 2221 AGGATCCTGATCCTGCCCGCG-ACGTCGGGCAGGTCCACGGTGACCTGTCGGTCGAACCG 2163 Query 14074 ACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAAC 14133 ||| || || | | ||| ||||| | ||| | |||||||||||| | || | Sbjct 2162 ACCGGGCCGCAACAAGGCTGAATCAAGCACGTCAGGCCTGTTCGTCGCCGCCAGCACGAT 2103 Query 14134 GATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTC 14193 | || || | ||||| || |||||||| || || || || |||||||||||||| Sbjct 2102 CACCCCGGTGTTCCCTTCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTC 2043 Query 14194 GCGTTCATCATTCGCAGGCATACCACCC--GCACTGCGTTGCTTACCGACGGCGTCAATT 14251 || || || ||| | || ||| || || | ||||||| || || ||||| || Sbjct 2042 CCGCTCGTCGTTCCC--GCCGCCCATCCCAGCCCCGCGTTGCCGCCCAACCGCGTCGATC 1985 Query 14252 TCATCGATGAAAACGATACATGG----TTGATTTTCACGGGCAACTTCAAAGATATCTCG 14307 || || ||||| ||||| || || ||| |||| || ||| || | ||| || Sbjct 1984 TCGTCAATGAACACGATGCAAGGCGCCTTGGATTTC----GCCTTTTCGAACAAATCGCG 1929 Query 14308 CACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGAT 14367 || | | || ||||| || || ||||||||||| || | || ||||| ||| || Sbjct 1928 AACACGCGACGCCCCGACCCCGACGAACATCTCCACGAACTCGGAGGCGGCGCATGAGAA 1869 Query 14368 GAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427 || || ||| | ||| ||||| | |||| |||||| | ||||| || ||||| || Sbjct 1868 AAACGGCACGCCCGCTTCGCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGG 1809 >seq564 Length=17261 Score = 109 bits (120), Expect = 7e-19 Identities = 234/338 (69%), Gaps = 14/338 (4%) Strand=Plus/Minus Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||||| |||| |||| ||||| || |||||| ||| |||||| || | ||| || Sbjct 9444 GATCCGCGACGAACTCGATGTAGTCCGACATCAGCTCTTTGTTCATGCCCACCAGGG-AC 9386 Query 129906 ATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG-GC 129963 | ||| || ||||| | | |||| | || ||||| ||||| |||||| |||||| || Sbjct 9385 ACGGGCAGTGCGTCGCACAGGAACTCTTTTTCAATCTCCACGGCTTCCATCACGATCTGC 9326 Query 129964 GTGA--ATGGTCTCCGTGCCAGGTCTATTGCGCAA--AG-TCTTGAAGAGTTCCACGGCA 130018 | | | || | ||| | ||| | ||| ||| || | | || || |||| | Sbjct 9325 TTCACCACGG-CGACGTCC--GGTTTGTTGTTCAAGTAGCTGTACAACAGG--CACGCGA 9271 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||| || || ||||| ||| |||||| || || || || ||| || ||| Sbjct 9270 AA-TCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAAACGTCAGCCCGGGC 9212 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || | || ||||| |||| |||| | || || || || || |||||||| | ||| Sbjct 9211 ATCAACCCGCGCTTTTTCAGCCAGTAGATGCTGCAGAACGACCCGGAGAAGAAAACACCC 9152 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || | ||||||||||| | ||| ||||| || ||||| Sbjct 9151 TCGATGCACGCGAACGCGATGAGTCGCTCGGCGAAGGA 9114 >seq290 Length=36984 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 179873 GAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTG 179932 |||||||||| |||| ||||| | ||| ||| ||| ||| ||| | | Sbjct 5359 GAAGACCCAAAATCTGCTTGATGTACGTGATCTCCGCGTTGTTCATGATTTGGTCGTGCG 5300 Query 179933 AAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGAC 179992 | || |||| ||| ||| | ||||| || || ||||| || ||||| | || || | Sbjct 5299 ACGCGTCTCTGACGTTTAAAAGTTTCCCGCGTAGCGGGAAAACGCCGTACCGGTCCCGGC 5240 Query 179993 CAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGA 180052 | ||||| || | || || || || | |||||||||||| || ||||||| || | Sbjct 5239 CCACCACGGACAAGCCGCTCACCGCAAGCGCCTTCGCGGAATCGCCTTCCGTCAAAATCA 5180 Query 180053 GCGTACACT--TTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAAT 180110 ||| || | | || || |||| ||||| | ||| |||||||||| ||||||||| Sbjct 5179 ACGTGCAGTGCTCGGAGTTTTTGCC--ACCTGCGTCGTTGGCGTCGTCCAGCTTGGGAAT 5122 Query 180111 ACCAGT 180116 ||||| Sbjct 5121 CCCAGT 5116 >seq382 Length=14395 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 128544 AAACTTGTTGTCAATGAACCAGATGGAACTGACATCAACGATGGCCATAGCCTTTTGTCC 128603 ||||||||| |||| |||||| || | ||||||||| ||| || | |||||||||||| Sbjct 3885 AAACTTGTTATCAAAGAACCAAATTTGATTGACATCAATGATAGCTAGAGCCTTTTGTCC 3944 Query 128604 CTTCTCGACACTGTCGAGGGGAACG 128628 |||||||| ||| ||||| | |||| Sbjct 3945 CTTCTCGATACTATCGAGAGAAACG 3969 >seq19 Length=40506 Score = 86.0 bits (94), Expect = 8e-12 Identities = 275/424 (65%), Gaps = 6/424 (1%) Strand=Plus/Plus Query 129746 TCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTTCTTT 129805 ||||||||||| | || || | | | ||| | ||||| ||||||| ||||| Sbjct 29383 TCGAAGAAGTTGGCTTTTCCTTGAAGGGAAATAGTTTCCATCCAATCAAACGGGTTTGGG 29442 Query 129806 GAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACGTACTCAATG 129865 | |||||| | | | | || | ||| || | ||||||| |||| |||| ||| Sbjct 29443 GTGTTCCATACCTTCGTCCCACCCAGCTGCACGATTAACCGATCCGCGACGAACTCGATG 29502 Query 129866 TACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATG 129925 ||||| | |||| | | | |||||| || | || || | |||||||| | | Sbjct 29503 TACTCCGCCATCAGCCCCGCGTTCATCCCAACAAGCGCGCACGAAAGCGCGTCGCACACA 29562 Query 129926 AACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTGCCA--- 129982 ||| | || ||||| ||||| || || ||||||| | || | | || | || Sbjct 29563 AACTCTTTTTCAATCTCCACCGCGTCTTTCACGATGTCCTGCAGTCTTTCGTTTTCAAGC 29622 Query 129983 GGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGTCA 130042 || || ||| | | || | |||| | || || ||| | |||||||| Sbjct 29623 GGGTGCTTCAGCATGCTGTACAACAAG--CACG-CGAAGTCGCAGTGCAAGCCCTCGTCT 29679 Query 130043 CGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAG 130102 ||| ||| || || || || || ||| ||| |||||| || || || || | |||| Sbjct 29680 CGGCTGATCAGCTCGTTTGAAAACGTCAGGCCTTTCATGAGGCCTCGTTTTTTGAGCCAG 29739 Query 130103 AAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGA 130162 |||||||| || || || ||| || ||||||||||| ||||||||||| | ||| Sbjct 29740 AAAATCGCGCAGAAGCTCCCGCTGAAAAAAATCCCCTCCACGCACGCGAACGCGACGAGG 29799 Query 130163 CGCT 130166 |||| Sbjct 29800 CGCT 29803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618426936159640