Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq633 351 1e-91 seq19 95.1 1e-14 >seq633 Length=11014 Score = 351 bits (388), Expect = 1e-91 Identities = 594/853 (70%), Gaps = 17/853 (2%) Strand=Plus/Plus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || || ||||||||||| || || || |||||| | | ||||||||| || |||||| Sbjct 5095 GACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATGATCTCCGTGCAC 5154 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 | || |||||| || || || | ||||| ||||||| || ||| || ||||| Sbjct 5155 AGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGGTTGCACGCGTCT 5214 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236 ||| | |||||| || | ||||| || || || | ||||| | ||| | | Sbjct 5215 TTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATCGCAAACCAAAGG 5274 Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCG 79296 | | ||| || ||||||| ||| | |||||| | |||| ||| Sbjct 5275 AGCTGCGCCTTGATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTACGCCGTGTACTTCTCT 5334 Query 79297 TTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGC 79356 | ||| ||||| || || ||| | || || |||||||||| |||||||||||| | Sbjct 5335 TCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCGGGCACATCAGCGTC 5394 Query 79357 CAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT-GAA 79415 || || ||| ||| ||| ||| |||||| ||||| | |||||| |||||| ||| Sbjct 5395 CATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCCACA-GGCCGTAGAA 5453 Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCAT 79475 |||||||| ||| || || | ||| |||||| | || ||||| |||| | Sbjct 5454 AAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAATCGAGCCAGTCGAA 5513 Query 79476 GATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCC 79535 ||||||| ||||||||| || || ||||| || |||| |||||||||||||| ||||| Sbjct 5514 GATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTGCGCTTGCCCCCGCC 5573 Query 79536 CTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGC 79595 |||| |||||||| || |||| |||||| || || |||||||| |||||||||| | Sbjct 5574 TTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGGACGATGCCGTTTGA 5633 Query 79596 GACGCCGTTCGTCCCGTTGATTCGTGTAC----CGCTCGCCCGAATGTTCGAGCAGTGG- 79650 | |||||| || ||| || ||||| || | | || ||| ||| | | ||| Sbjct 5634 GGTGCCGTTTGTGCCGCGGA----TGTACGACGCGGTGCCTCGGATG-TCGTGGA-TGGA 5687 Query 79651 -ATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGAT 79709 | ||||| || |||| |||| |||||| |||||||||||| || || |||||||| Sbjct 5688 CAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGGTGTCGTAGAT 5747 Query 79710 GCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTT 79769 |||||||| ||||| |||||||| |||| ||||||||| ||| | ||| ||| | Sbjct 5748 ACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCTGCGGGCGGGG 5807 Query 79770 CGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATC 79829 ||||||| |||||| || || |||| ||||||||| | | | ||| | || | Sbjct 5808 CGTACCGCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTCGCTGAGCATGTG 5867 Query 79830 GTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAA 79889 |||||| || || || | | | || ||||||||||| | ||||||||||| Sbjct 5868 GTACGTATCGATGGCGTTCTCCA---CATCCTTGTGGATGCCGATGGAGACGCGCATGAG 5924 Query 79890 GAGGTACTGGGGC 79902 |||| ||||||| Sbjct 5925 CAGGTGCTGGGGC 5937 Score = 279 bits (308), Expect = 6e-70 Identities = 581/855 (68%), Gaps = 19/855 (2%) Strand=Plus/Minus Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGT 19161 ||| ||| |||| ||||||| ||| | |||||||||| | | || | | | Sbjct 5937 GCCCCAGCACCTGCTCATGCGCGTCTCCATCGGCATCCA---CAAGGATGTGGAGAACGC 5881 Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | ||| || ||| || || | ||| || | | ||||||||| |||| || || || Sbjct 5880 CATCGATACGTACCACATGCTCAGCGAGCGCTGGATGACGCACGCGTCGCCCACGCTGTT 5821 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||| ||||||| | ||||||| | ||| || ||||| | || |||||||| || Sbjct 5820 CAACAGCGGTACGCCCCGCCCGCAGCTCTCGTCGTGCTTCCTGATCGCCATGAAGGAGGA 5761 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 | ||| ||||| |||||||| || || |||||||||||| |||||| |||| |||| Sbjct 5760 CTCCATCGAGGGTATCTACGACACCCTGAAGGAGTGCGCGTGCATCTCAAAGTCCGCCGG 5701 Query 19342 GGGTATCGGGAT--CCACTGCTCGAATATCCGGT----CGAGTGGTACACGAATCAATGG 19395 |||||||| | ||| | | ||| ||||| || || ||||| || || Sbjct 5700 CGGTATCGGTCTGTCCA-TCCACGAC-ATCCGAGGCACCGCGTCGTACA----TCCGCGG 5647 Query 19396 GACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAG 19455 || ||||| | |||| |||||||| ||||| ||||| |||||| |||| || | Sbjct 5646 CACAAACGGCACCTCAAACGGCATCGTCCCCATGCTGCGCGTGTTCAACGACACCGCGCG 5587 Query 19456 GTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATG 19515 |||||| |||| || || ||||| ||||||||| |||| || |||||||| || || || Sbjct 5586 GTACGTGGACCAAGGCGGGGGCAAGCGCAAGGGCGCGTTTGCGATCTACCTTGAACCGTG 5527 Query 19516 GCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCG 19575 |||| ||| || | || | ||||| || | |||||| || | || || ||| Sbjct 5526 GCACAGCGACATCTTCGACTGGCTCGATTTGAGGAAGAACCACGGCAAGGAAGAAGCGCG 5467 Query 19576 CTGTCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634 | |||||||| ||| ||||||| ||||| ||||| |||||| ||| ||| ||| Sbjct 5466 CGCGCGCGACCTTTTCTACGGCCT-GTGGACCAACGACCTGTTCATGCAGAGGGTGGAGT 5408 Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACG 19694 ||| |||||| |||||||||||| |||| ||||| || || | || || | Sbjct 5407 CAAACGGCGAATGGACGCTGATGTGCCCGAACGAGTGCCCCGGGCTCGCGGATTGCTGGG 5348 Query 19695 GCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGG 19754 | ||||||||| | ||| |||| | | |||| | |||| ||||||| Sbjct 5347 GTGAGGCGTTCGAAGAGAAGTACACGGCGTACGAAAAAGCGGGCAAAGGCAAGAAGACCA 5288 Query 19755 TCCGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCG 19813 || ||| | | | | | || ||| | ||| || || || || ||||||| || Sbjct 5287 TCAAGGCGCAGCTCCT-TTGGTTTGCGATTCTCGAATCGCAAGTAGAAACCGGCAACCCC 5229 Query 19814 TACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC 19873 |||||| | ||| ||||| ||| ||| || || ||| ||||| | || |||| Sbjct 5228 TACATGCTGTTCAAAGACGCGTGCAACCGCAAATCCAACCAGCAGAACCTGGGTACGATT 5169 Query 19874 AAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTG 19933 |||||| |||||||| || || ||||| ||| | | ||||| || || || ||| Sbjct 5168 CGGTCGTCGAACCTGTGCACGGAGATCATCGAGTTCACGTCCCCGGAGGAAACCGCGGTG 5109 Query 19934 TGTAATCTGGCGTCC 19948 || || || |||||| Sbjct 5108 TGCAACCTCGCGTCC 5094 Score = 257 bits (284), Expect = 2e-63 Identities = 549/817 (67%), Gaps = 31/817 (4%) Strand=Plus/Minus Query 20018 GTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGC 20077 || ||||| || ||||| | ||||||| ||||| ||||| ||| | ||||| Sbjct 4955 GTAACGCGCAACCTGAACAGGATCATCGACGTGAACTACTACCCAGTGGAGACCGCGCGG 4896 Query 20078 AAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTC 20137 ||||| ||||| ||||| || |||| |||||||||||||||| || || || ||| Sbjct 4895 CGTTCGAACATGCGGCACCGCCCCATCGGCCTCGGCGTCCAGGGCCTCGCGGATGTGTTC 4836 Query 20138 ATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTC 20197 || |||||||||| | ||||| ||| | |||| | |||||| || || ||| Sbjct 4835 ATCCTGCTCGGCCTGGCCTTCGATTCCCCCGAAGCGCAGAAACTCAACGCGGAGATTTTC 4776 Query 20198 GAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCG 20257 || | | ||| ||| || || |||||| || | || | |||||| || Sbjct 4775 GAAACGATCTACTTCGCCGCGCTGACGGAATCCAACGCCATAGCGGTGGTGGACGGGACG 4716 Query 20258 TACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC 20317 ||||| |||| | |||||||| | ||| |||| ||||| ||||| || ||||||||| Sbjct 4715 TACGAAACGTACGCCGGGTCGCCTGTTTCCAAGGGCATCCTGCAGCCTGAAATGTGGGGC 4656 Query 20318 GTCAC--TGA----------------GAATGA--GTTTTGGAGCGCCCTCAAGGTTGAGA 20357 ||||| ||| | | || | | || || ||||| ||| Sbjct 4655 GTCACGGTGATGCCCGGCGGGGACAGGCACGACTGGGTCGGTCTGCGCTCAA-----AGA 4601 Query 20358 TCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCG 20417 || | | ||| | || |||||| | ||||| || |||||||| ||||| ||||| Sbjct 4600 TCGCGGCGAGCGGCGTGCGGAACTCGCTTCTCGTGGCTCCCATGCCCACCGCGTCGACGT 4541 Query 20418 CCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTC 20477 | || ||| |||| ||||||||| ||||| || ||||| | |||||||||| | | Sbjct 4540 CGCAAATCCTGGGCAACAACGAGTGCTTCGAACCCTACACCAGCAACATCTACGCCAGAC 4481 Query 20478 GTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAGA 20537 | || |||| |||||| | |||| ||||| ||||| | || ||| | | Sbjct 4480 GGGTGCTTTCCGGAGAGTTCACCGTGGTGAACAACCACCTTCTTTCGGATTTGACGGAAC 4421 Query 20538 TCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGGGAGCGTCCA 20595 | | ||||| ||| | | ||||| || | | ||| | | ||| ||||| || Sbjct 4420 TAGGGTTGTGGGACCCCTCACTCAAGAACGACCTCATCTCCAA--CAACGGCAGCGTGCA 4363 Query 20596 GGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACA 20655 | |||| |||||| || | ||||||| ||||||| ||||| ||||||||| || Sbjct 4362 AGGCCTGGACATCCCCGAGGAACTCAAGGCGATTTACAAAACCGTGTGGGAAATCAAGCA 4303 Query 20656 G-AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGC 20714 | | || | | |||||||| ||||| || ||||| | ||||||||| |||||| Sbjct 4302 GCGCGTGC-TTGTGGACATGGCCGCCGACCGAGGCGCGTTCATCGACCAAAGCCAGTCCT 4244 Query 20715 TCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCT 20774 |||| || |||| | | ||| | || |||||| | ||| |||| | |||| || Sbjct 4243 TCAACGTGCACATGTCGGACGCGAACGCGGGGAAGCTCACGTCCCTGCACTTCTACGCCT 4184 Query 20775 GGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 || | |||||||| |||||||| |||||||| ||||| Sbjct 4183 GGAAGAAGGGGCTGAAGACGGGGATGTACTACCTGCG 4147 Score = 199 bits (220), Expect = 4e-46 Identities = 539/822 (66%), Gaps = 21/822 (3%) Strand=Plus/Plus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| | |||| |||||||| |||||||| || ||||||||||| |||| | ||| Sbjct 4137 GGCGCGCGAGCGCAGGTAGTACATCCCCGTCTTCAGCCCCTTCTTCCAGGCGTAGAAGTG 4196 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 || || ||||| || ||| || | |||| | ||||| |||||| || Sbjct 4197 CAGGGACGTGAGCTTCCCCGCGTTCGCGTCCGACATGTGCACGTTGAAGGACTGGCTTTG 4256 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| |||| || |||||||| |||||||| | | | ||| || ||||| Sbjct 4257 GTCGATGAACGCGCCTCGGTCGGCGGCCATGTCCACAAGCACGCGCTGCTTGATTTCCCA 4316 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACC 78422 | ||| |||||| ||||| || || || |||||||||| |||| ||||| || Sbjct 4317 CACGGTTTTGTAAATCGCCTTGAGTTCCTCGGGGATGTCCAGGCCTTGCACGCTGCCGTT 4376 Query 78423 GGCTCGCACA--ATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTG-AAGATC 78479 | | | | | | || ||||| | |||||| ||| | | ||| | | ||| Sbjct 4377 G--TTGGAGATGAGGTCGTTCTTGA-GTGAGGGGTCCCACAACCCTAGTTCCGTCAAATC 4433 Query 78480 CCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGAT 78539 | | ||||| ||| | || | |||||| |||| || ||| | |||||| Sbjct 4434 CGAAAGAAGGTGGTTGTTCACCACGGTGAACTCTCCGGAAAGCACCCGTCTGGCGTAGAT 4493 Query 78540 GTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGT 78599 |||| | ||||| || ||||| ||||||||| |||| ||| || | ||||| ||||| Sbjct 4494 GTTGCTGGTGTAGGGTTCGAAGCACTCGTTGTTGCCCAGGATTTGCGACGTCGACGCGGT 4553 Query 78600 CGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCT---------- 78649 |||||||| || || || || || ||||| | || || | ||||| Sbjct 4554 GGGCATGGGAGCCACGAGAAGCGAGTTCCGCACGCCGCTCGCCGCGATCTTTGAGCGCAG 4613 Query 78650 --CGACC---TTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTG 78704 ||||| | | | ||||| || ||| || |||||||| || || || Sbjct 4614 ACCGACCCAGTCGTGCCTGTCCCCGCCGGGCATCACCGTGACGCCCCACATTTCAGGCTG 4673 Query 78705 AAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGC 78764 ||||| |||| ||| | |||||||| | |||| ||||| | || ||| || || Sbjct 4674 CAGGATGCCCTTGGAAACAGGCGACCCGGCGTACGTTTCGTACGTCCCGTCCACCACCGC 4733 Query 78765 GAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAG 78824 | || || || ||| || ||| ||| | | ||||| || || |||||| Sbjct 4734 TATGGCGTTGGATTCCGTCAGCGCGGCGAAGTAGATCGTTTCGAAAATCTCCGCGTTGAG 4793 Query 78825 CTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCC 78884 | |||| | || ||||| | |||||||||| ||||| ||||| || ||||| Sbjct 4794 TTTCTGCGCTTCGGGGGAATCGAAGGCCAGGCCGAGCAGGATGAACACATCCGCGAGGCC 4853 Query 78885 CTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGG 78944 ||||||||||| |||| || ||||| |||||||| || || | ||| || Sbjct 4854 CTGGACGCCGAGGCCGATGGGGCGGTGCCGCATGTTCGAACGCCGCGCGGTCTCCACTGG 4913 Query 78945 GTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGAC 78986 ||| ||||| ||||||| | ||||||||| ||||| || Sbjct 4914 GTAGTAGTTCACGTCGATGATCCTGTTCAGGTTGCGCGTTAC 4955 >seq19 Length=40506 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 || ||| | || || || |||||||| || || || ||| || ||||| || ||| Sbjct 29801 CGCCTCGTCGCGTTCGCGTGCGTGGAGGGGATTTTTTTCAGCGGGAGCTTCTGCGCGATT 29742 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 |||||||||||||| || ||||||||| ||||||| || || ||||||||||| | Sbjct 29741 TTCTGGCTCAAAAAACGAGGCCTCATGAAAGGCCTGACGTTTTCAAACGAGCTGATCAGC 29682 Query 60102 CGGGACGAGGGC 60113 || ||||||||| Sbjct 29681 CGAGACGAGGGC 29670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548517470337360