Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq964 131 8e-26 >seq964 Length=11568 Score = 131 bits (144), Expect = 8e-26 Identities = 291/431 (68%), Gaps = 13/431 (3%) Strand=Plus/Minus Query 64055 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 64114 ||||| |||||| |||||| || | |||||| ||| || ||| ||||| | || Sbjct 9390 GACGT--TTCCCAGCGGCTCCATGACCCTGGACATCGCGCTCGGC---GGGGGTTTACCA 9336 Query 64115 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 64174 | || ||| | ||||| || |||||||| ||| | ||||| |||| ||| || Sbjct 9335 CGCGGGCGGATCGTGGAGATTTACGGCCCTGAAAGTAGTGGGAAAACAACCCTGGCACTG 9276 Query 64175 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 64234 ||||| |||| | |||||| ||| || | || || || ||||| |||||| Sbjct 9275 CACGCCATGGCGGAGATGCAGAAACTCGGCGGGACCGTGGCGCTGATTGACGCGGAGCAC 9216 Query 64235 TCCCTGGACCCTGAGTACGCCAAGGCGC---TCGGTGTGGACCTCGACAACCTCGTGGTG 64291 | | ||||| |||||| | ||||| | || ||||| | ||| | |||||||| Sbjct 9215 GCGTTTGACCCGGAGTACTC---GGCGCGGTTGGGGCTGGACGTGGACGAAGTCGTGGTG 9159 Query 64292 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 64351 ||||||||| || |||||| || | || | ||||| ||| ||| ||| | Sbjct 9158 TGTCAGCCGGAAACGGGCGAGATGGGTTTAGAAGTAGTTGATACCCTTGTCCGGTCAAAC 9099 Query 64352 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 64411 | | || | |||| || || || || || || || || ||||| |||| |||| Sbjct 9098 GCGGTGGATTTGATCGTGGTGGATTCCGTCGCCGCGCTCGTTCCGCGGTCCGAAATCGAG 9039 Query 64412 GGCGACATCGGGGACAGTC-ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCG 64470 ||||| || ||| | ||| | || ||| ||||||||| ||||||||||| || |||| Sbjct 9038 GGCGAAATTGGG-ATGGTCCAGGTTGGCGCGCACGCGCGGCTCATGTCGCAAGCGCTGCG 8980 Query 64471 CAAGCTCACCG 64481 ||| ||| || Sbjct 8979 CAAAATCAACG 8969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232800166938059