Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015-
04-28] 1,069 sequences; 19,582,411 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq520 86.0 5e-12
seq247 84.2 2e-11
>seq520
Length=32656
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/178 (72%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || || || ||||| || || || || |||| |||||||| |||||||| ||
Sbjct 23603 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAG 23662
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213
|| |||||||||||||||| ||| | || || |||||| ||| || |||| |||
Sbjct 23663 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 23721
Query 39214 G-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT--CAGCGTTT 39268
| | | || || |||||||| |||| ||||| | || ||||| | ||||||
Sbjct 23722 GTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTACCCGTGACTGCGTTT 23779
>seq247
Length=13427
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
||||| | | ||| | ||||| || |||||| || || || || || ||||| ||
Sbjct 6255 CCTCCGCGCAGGCGGAGCACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCG 6196
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || | || |||||||| |||||||| || || || ||||||||||| | |||
Sbjct 6195 AGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGGG 6136
Query 39178 ACGCTCTCTTTGTCCATGATTTTC 39201
| | ||| |||||| |||||||
Sbjct 6135 ATACCCTCCTTGTCCTGGATTTTC 6112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540003691997
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |