Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq290 170 4e-37 seq247 170 4e-37 seq520 150 4e-31 seq564 149 1e-30 seq648 140 7e-28 seq157 89.7 1e-12 >seq290 Length=36984 Score = 170 bits (188), Expect = 4e-37 Identities = 345/510 (68%), Gaps = 4/510 (1%) Strand=Plus/Minus Query 273597 GGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAAGAACCATTCACC 273656 |||||||| | |||| ||| ||||| || ||||| ||||| | || |||||| Sbjct 6380 GGGTTGTAGTTGGGAATCGACGTTGACCAGCCCGTGCCGATACCTTCCGCGCCGTTCACC 6321 Query 273657 AGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCACCATCGTCGTAA 273716 | | ||| |||||||||| || | ||||| || || | ||||| || | | Sbjct 6320 AACAACAGCGGCATAATTGGGAGGTAGTGCTCGGGTTCGATAACCTGGCCATCCTCATCA 6261 Query 273717 AGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTCTGA--GGATTCA 273774 ||||| | ||||||||| || || || ||| | | |||| | | || || Sbjct 6260 AGGTAATCCAACAAAGCGTCGTCGCACTCGGGGAAGA--TGGCGCGGCAAATAGGCGCCA 6203 Query 273775 GTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAA 273834 |||||| ||||| | | | ||| ||||||||||| ||||||||||||| || | Sbjct 6202 AACGCGTGAAGATGTAACGCGGAGACGCGTGGTCCTTGCCGCCTTGCAGCCTCGTGCCGA 6143 Query 273835 ACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATAT 273894 |||| || |||| | ||| | ||||||||| || ||| ||||||| |||| Sbjct 6142 ACTGCCCGGAAGGCACCAAAAGGTTCACGTTGTTGCTCCCCACGAAATCCTGCGCCAGCC 6083 Query 273895 TCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATAT 273954 |||||| || | |||||| | ||||||||||| || ||| ||| ||| || | Sbjct 6082 CCACGATCGTGGACGCAAGGGACGCTTCGCCGTGGTGGTACGCGGAGTGCTCGCTGACGT 6023 Query 273955 AACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACA 274014 | || |||| ||| || || || | || ||| || |||||||| || ||| Sbjct 6022 ACCCGCTGAGCTGCGCGACTTTGATGTCTTGTTTCAGCTTGCGCTTGAAGCACGAGAACA 5963 Query 274015 ACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATACTGCGTTCCAAAT 274074 ||| || |||||||| ||||||||||| || || || || ||||| || | ||| | Sbjct 5962 GCACTTTGCGCTGCGACGGCTTGAACCCGTCCACCACGGACGGAATGCTCCTCAACAAGT 5903 Query 274075 CATACCGAGAGAACAAAATCAGTTCCTTGT 274104 || || |||||||||||||| || |||| Sbjct 5902 CAGCCCTGGAGAACAAAATCAGCTCTTTGT 5873 >seq247 Length=13427 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| || ||||| || | |||| ||| || ||||||||||| || || Sbjct 6256 ACCTCCGCGCAGGCGGAGCACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGC 6197 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || || || | || || |||||| || Sbjct 6196 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGG 6137 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| ||||| || || || ||| | ||||| |||||||||| || || Sbjct 6136 GATACCCTCCTTGTCCTGGATTTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCAC 6077 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||||||||| Sbjct 6076 CTCGAGGGTGATGGTCTTACCCGT 6053 >seq520 Length=32656 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || || || || | ||| ||| || ||||||||||| || || Sbjct 23567 CCACCGCGAAGGCGCAGGACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGCG 23626 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || || || ||||| | ||| || ||||| ||| Sbjct 23627 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGA 23686 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | ||||| |||||||||| || || Sbjct 23687 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 23746 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||||||||| Sbjct 23747 TCCAGGGTGATGGTCTTACCCGT 23769 >seq564 Length=17261 Score = 149 bits (164), Expect = 1e-30 Identities = 319/466 (68%), Gaps = 22/466 (5%) Strand=Plus/Plus Query 229944 AAATCGTTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGG 230003 || || || || ||||| ||| |||||| | |||| | |||||| || | ||||||||| Sbjct 9111 AAGTCCTTCGCCGAGCGACTCATCGCGTTCGCGTGCATCGAGGGTGTTTTCTTCTCCGGG 9170 Query 230004 AGTTTCTGCGCCATCTTTTGGCTACGCAACAAGGGCG---TCATGCCCGGGCTCGGTCTG 230060 |||||| ||||| ||||| || ||| ||| | ||||||||||| | Sbjct 9171 TCGTTCTGCAGCATCTACTGGCTG---AAAAAGCGCGGGTTGATGCCCGGGCTGACGTTT 9227 Query 230061 TCGAACGAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGG-TCTTGTA 230119 || ||||| |||||||| | |||||||| ||||||| | |||| ||| | | ||||| Sbjct 9228 TCCAACGAGCTCATCAGCCGCGACGAAGGGCTTCACC-GTGATTTCGCGTGCCTGTTGTA 9286 Query 230120 TTCGAAGCTA----AATAACAAACTACCTTTCGAAACGGTGAAACAAATCGTCACAGAAG 230175 ||||| || ||||||| ||| |||||| || ||||| | |||| Sbjct 9287 C----AGCTACTTGAACAACAAACCGGACGTCGCCGTGGTGAAGCAGATCGTGATGGAAG 9342 Query 230176 TAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCT-TGCCGTCTTATCGGCATG 230234 || | | |||||| |||||| | |||||||| | || || | || | |||||| Sbjct 9343 CCGTGGAGATTGAAAAAGAGTTCCTGTGCGACGCACTGCCCGTGTCC-CTGGTGGGCATG 9401 Query 230235 AATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTC-GTGGC-GC 230292 || || || ||| | | || ||||| ||||| || |||| | || | ||| | || Sbjct 9402 AACAAAGAGCTGATGTCGGACTACATCGAGTTCGTCGCGGATC--ACTTGCTGTGCCAGC 9459 Query 230293 TAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCAC 230352 | ||| || || | || ||| || |||||| |||| | ||||||||||| || | Sbjct 9460 TCGGGCTGGAAAAGGAATACAACACCGCGAACCCGTTCGACTGGATGGAGCTCATCTCGC 9519 Query 230353 TCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA 230398 | || || ||||| ||||| |||||||| || || |||| || || Sbjct 9520 TTCAAGGTAAAACCAACTTTTTCGAAAAACGCGTAGGCGAGTACCA 9565 >seq648 Length=41169 Score = 140 bits (154), Expect = 7e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 282870 GAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA 282929 |||||||| || ||| ||| ||||| | | |||| ||| | |||||||||||||| Sbjct 13572 GAACCACCGCGGAGGGAAAGCACCAGGTCGAGCGTGGATTCCATCTGGATGTTGTAGTCC 13513 Query 282930 GCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 || | ||||||| | || || || || | || | ||||| | ||| || ||| | Sbjct 13512 GCCAACGTGCGGACGTCTTCGAGCTGCCTGCCCACGAAGATGAGACGCTGGTGG-CGGGG 13454 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || | || ||| |||| |||||||| || || ||| | ||||| |||||||||| || Sbjct 13453 GGTAAGCCTTCCCTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCA 13394 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 || || || ||||| ||||| || ||||| ||||| ||||| |||||||||| Sbjct 13393 ACCTCCAGGGTGATGGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCATTT 13342 >seq157 Length=13471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 |||||||| || | ||| ||||| || || ||||||| ||||| |||||| || Sbjct 3753 GGGAACCCCTCGACCTGGCCGTTGTTGATGGCTTTCATCAGGGTCGATTTGCCACAGCCG 3812 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGT---GTTGTTC 317145 ||||||||||| | || ||||| || || ||||||| | || | || ||||||| Sbjct 3813 TTGGGGCCGCACAAGCCGTACCGCTTGCCTTTCTTCATGTGAA---GCGTACAGTTGTTC 3869 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | |||||| | || || ||||| ||||| || || | || ||||||||||| Sbjct 3870 AACAGAATCAGCGCGCCGTACGCCAGCGAGAAGTCGCACTTGCAAAGGTCCTCGCC 3925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046724863271126