Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq247 114 9e-21 seq520 113 3e-20 seq648 96.9 2e-15 >seq247 Length=13427 Score = 114 bits (126), Expect = 9e-21 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||||||| ||||| |||||||||||||| ||||| ||| | || || Sbjct 6238 CACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 6179 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || || || | |||||||| || | || | ||| ||||| ||| Sbjct 6178 AAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 6119 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || ||| ||||| | | |||||||| | || |||||||| | || || ||||| Sbjct 6118 GATTTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTT 6059 Query 44308 TCCCGTGA 44315 ||||||| Sbjct 6058 ACCCGTGA 6051 >seq520 Length=32656 Score = 113 bits (124), Expect = 3e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| ||||| |||||||||||||| ||||| ||| |||| || Sbjct 23585 ACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCGTCCTCA 23644 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | || | |||||||| ||| Sbjct 23645 AGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 23704 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || |||||||||| || || ||||| Sbjct 23705 ATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTA 23764 Query 44309 CCCGTGA 44315 ||||||| Sbjct 23765 CCCGTGA 23771 >seq648 Length=41169 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||| |||||| ||| | ||||||||||| || || | ||| |||| || Sbjct 13552 CACCAGGTCGAGCGTGGATTCCATCTGGATGTTGTAGTCCGCCAACGTGCGGACGTCTTC 13493 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| | || | ||||| | |||||| || | | || | |||||| | ||| Sbjct 13492 GAGCTGCCTGCCCACGAAGATGAGACGCTGGTGG-CGGGGGGTAAGCCTTCCCTGTCCTG 13434 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | |||||||| | || || ||||||| || || ||||| Sbjct 13433 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCAACCTCCAGGGTGATGGTCTT 13374 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||||||||| ||||| Sbjct 13373 GCCAGTCAACGTCTTCACGAAGATCTGCAT 13344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985709887573