Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq5125 87.8 2e-12 >seq5125 Length=3551 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 151097 AGCTGATCCGGCAGGCCAACGAGGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGA 151156 |||||| | |||| ||| | |||||||||||| || ||||||||| ||| || |||| Sbjct 1079 AGCTGACCAAGCAGCCCATCAAGGGCCGCAAGCTGGGGGGCGGCATCCGGTTTGGTGAGA 1138 Query 151157 TGGAGCGCGACTGCCTCATCGCGCACGGCGCGGCCAAC 151194 ||||||||||| |||| | || ||||| |||||| || Sbjct 1139 TGGAGCGCGACAGCCTGCTGGCCCACGGGGCGGCCTAC 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608745661068800