Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2517 95.1 3e-14 >seq2517 Length=9782 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 157271 CTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGG 157330 || |||||||| ||||||||||| || | ||| || | |||||||| || || ||| Sbjct 5576 CTCTTCTCAAAGAAGTTGGTCTTGCCGTTGAGGCTGATGAGCTCCATCCAGTCAAAGGGG 5517 Query 157331 TTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAAC 157390 ||||||| || |||| ||| ||| | ||||| |||| | ||| ||||||||| Sbjct 5516 TTGGCGCTGTGGTACTGCTTCTCGCAGCCCAGGGCCACCAGCAGGCGGTCGGCCACAAAC 5457 Query 157391 TTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGCC 157447 | |||||||| | ||| ||| || | || ||||| || ||||||| || ||| Sbjct 5456 TCGATGTACTGCGCCATCAGCTTGCCGTTCATGCCGATCAGGTCGACGGGCAGGGCC 5400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073673948712960