Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5800 84.2 2e-11 >seq5800 Length=2805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 || || || ||||| ||||||||| || || ||||| || || | ||| || |||| | Sbjct 2543 GTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAGCCCGACGTCTGCCGACCGC 2484 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTG 21121 ||||||||||||||||||||||||| |||||||||||| Sbjct 2483 TGGTACAGCTGGCAGGACAGCTCCCTGTCGCTCACGTAAAACTG 2440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427740965145600