Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4914 84.2 2e-11 >seq4914 Length=3905 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/135 (78%), Gaps = 8/135 (6%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCA-CGTGCGGCATGATGTA 33632 || |||| ||||||||||| ||| | |||||| ||||||||| |||| ||||| | || Sbjct 2331 AGGTGGGTGACAAGTTTGCGTCGCGCCACGGCC-AGAAGGGCACCGTG-GGCATCACCTA 2274 Query 33633 CGAC--CAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAAC 33690 | || ||| ||||||||| |||||||| || ||| | || |||||||| || ||||| Sbjct 2273 C-ACTTCAG-AGGACATGCCCTTCACGGCGGAGGGCATCGTGCCGGACCTGATCGTCAAC 2216 Query 33691 CCGCATGCGTTCCCC 33705 || || || ||||| Sbjct 2215 CCCCACGCCATCCCC 2201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356204424468160