Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq6716 100 4e-16 >seq6716 Length=19574 Score = 100 bits (110), Expect = 4e-16 Identities = 115/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025 || ||| |||||| |||||||| | || || || ||||||||||| ||||| || ||| Sbjct 10538 AAGTCGGTGTGCAGGCCCTCGTCACGGCTGATGAGCTCGTTGGAAAAGGTGAGGCCCGGC 10597 Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA---TGACCCAGAAAAGAAGATT 50082 || ||||| ||||| || |||||||| |||| |||| | || | | | |||||||| Sbjct 10598 ATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAGCTGCCGCTG--AAGAAGATG 10654 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 || || |||||||| |||| || || | ||| Sbjct 10655 CCCTCGACTGCGGCGTAGGCCACCAGCCGCTC 10686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718208465420800