Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq6716 86.0 8e-12 >seq6716 Length=19574 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 33310 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 33369 || ||| |||||| |||||||| | || || || ||||||||||| ||||| || ||| Sbjct 10538 AAGTCGGTGTGCAGGCCCTCGTCACGGCTGATGAGCTCGTTGGAAAAGGTGAGGCCCGGC 10597 Query 33370 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCT 33429 || ||||| ||||| || |||||||| |||| ||| || |||||||| || Sbjct 10598 ATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAGCTGCCGCTGAAGAAGATGCCC 10657 Query 33430 TCTACTGCAGCAAAGGC 33446 || ||||| || |||| Sbjct 10658 TCGACTGCGGCGTAGGC 10674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622894872435200