Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3912 122 2e-22 >seq3912 Length=5383 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 364180 GATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTA 364239 || ||||||||||||||| ||| |||||| |||| || || || || |||||| Sbjct 240 GACTCGTGCAACCGCAAGAGCAATCAGCAGAACCTGGGCACCATCAAGTGCTCCAACCTG 181 Query 364240 TGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCG 364299 || ||||||||| | || |||||||| ||||||||||| || || || ||||| |||||| Sbjct 180 TGCACCGAGATTGTGGAGTACACCGCCCCCGACGAGACCGCGGTGTGCAACCTGGCGTCG 121 Query 364300 ATCGCGCTTCCGGCGTTTGT 364319 |||||||| ||| |||||| Sbjct 120 ATCGCGCTGCCGCGGTTTGT 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303241381255040