Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq4504 93.3 1e-14 >seq4504 Length=4869 Score = 93.3 bits (102), Expect = 1e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 1066 TCGACGGGCCTCTCGTTCGCTTTTCCGTCCGGCTACTACGGTCGGGTGGCCCCGCGCTCG 1125 ||||| |||||| | || | ||| ||||| |||||| || || || ||||| ||| Sbjct 2327 TCGACCGGCCTCCGCATTGCGGTGCCGGCCGGCACCTACGGCCGCGTCGCGCCGCGGTCG 2386 Query 1126 GGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGGGCGTGGTGGATCCCGGTTACCGG 1185 || ||||| ||||| || || ||| ||||||||||||||||| | |||||| Sbjct 2387 GGGCTGGCGGCGAAGCACTTCATCGACACCGGGGCGGGCGTGGTGGACGAGGACTACCGG 2446 Query 1186 GGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGAC 1221 ||||| | |||||| |||| || |||| |||||| Sbjct 2447 GGGGAGCTCAAGGTGCTGCTCTTCAACCACTCGGAC 2482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145188413040000