Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1772 109 7e-19 >seq1772 Length=12322 Score = 109 bits (120), Expect = 7e-19 Identities = 111/144 (77%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || ||||| || ||||| ||||| || || || | | | || |||||||| || || Sbjct 5639 TGATTCTTGGCAGCGTCGCCGATGAGGCGCTCGCTGT---CGGTGAACGCGACATAGGAG 5695 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || ||||| || || || |||||||| ||||| || || ||||||||||| |||||||| Sbjct 5696 GGCGTCGTGCGGTTGCCCTGGTCGTTGGCAATGATCTCCACGCGGTCGTTCTGCCAGACA 5755 Query 8108 CCGACGCACGAATACGTTGTTCCT 8131 || |||||||| ||||| || ||| Sbjct 5756 CCCACGCACGAGTACGTGGTGCCT 5779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635079448844800