Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5800 98.7 8e-16 >seq5800 Length=2805 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || || || | |||| ||||| || | ||| ||||||||| ||||| ||||| ||| Sbjct 2561 ACCTGCGCGAGCATGATGGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAGC 2502 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 || | ||| |||||| |||||| ||||| || || ||||| | |||||||||||||||| Sbjct 2501 CCGACGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCTGTCGCTCACGTAAAAC 2442 Query 29998 TG 29999 || Sbjct 2441 TG 2440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408584134218560