Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3912 104 2e-17 >seq3912 Length=5383 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519 ||||| |||||||| ||||| || || ||||| |||| | || |||||| ||| || ||| Sbjct 116 GCGATCGACGCCAGGTTGCACACCGCGGTCTCGTCGGGGGCGGTGTACTCCACAATCTCG 175 Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579 | |||||||||| ||| || ||| |||| || ||||||||||| || || |||||| Sbjct 176 GTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTGCTGATTGCTCTTGCGGTTGCAC 235 Query 147580 GCGTC 147584 | ||| Sbjct 236 GAGTC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476571164659200