Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5800 118 1e-21 >seq5800 Length=2805 Score = 118 bits (130), Expect = 1e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 ||| || || | |||| ||||||||||| ||| ||| ||||||||||| |||||||| Sbjct 2562 CACCTGCGCGAGCATGATGGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAG 2503 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 || | ||| |||||| ||||||||||||||| || ||||||| |||| ||||||||| Sbjct 2502 CCCGACGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCTGTCGCTCACGTAAAA 2443 Query 147114 CTG 147116 ||| Sbjct 2442 CTG 2440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583438987008000