Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6716 87.8 2e-12 >seq6716 Length=19574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||| | ||||| || |||||||| || | || || | ||||| ||||| ||||| Sbjct 10531 GCAGCCAAAGTCGGTGTGCAGGCCCTCGTCACGGCTGATGAGCTCGTTGGAAAAGGTGAG 10590 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734 || ||||| || || ||||| ||||||||||| ||||| ||| ||| | || |||| Sbjct 10591 GCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAGCTGCCGCTGAAGA 10649 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 ||||||| || ||||| || | || || || | ||| Sbjct 10650 AGATGCCCTCGACTGCGGCGTAGGCCACCAGCCGCTC 10686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686851099660800