Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq664 95.1 2e-14 >seq664 Length=23666 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/279 (68%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596 ||||||||||||||||| || || | || || || || || || | ||| || || || Sbjct 6660 TCAAAGCCATCCATCTCTGTCAGCAGCTGGTTGATCGTCTGCTCGCGCTCGTCGTT-GCC 6602 Query 11597 GGCATACCACCAGCA-CTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAAT 11655 | || | | || | ||| || |||||| ||||| ||||| || ||||||| || Sbjct 6601 GCCACCCATGCCGCTGCCGCGCTGGCGGCCCACGGCATCGATCTCGTCGATGAAGATGAT 6542 Query 11656 ACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 || ||| || | ||| | ||||| || ||||| || | |||| ||||| || Sbjct 6541 GCAGGGTGCCTTGGCCTTGGCCTTCTCAAACAGGTCGCGCACGCGGCTGGCGCCCACGCC 6482 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 ||||||| ||||||||| | | ||| | ||| || ||| ||| | ||||| Sbjct 6481 GACAAACAGCTCCACAAACTCAGAGGCGGCGCAGGAGAAGAAGGGGGTGCCAGCCTCACC 6422 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || | ||| ||| ||||||||||| || ||||| || Sbjct 6421 AGCCACGGCCTTGGCCAGGAGGGTCTTGCCGGTACCAGG 6383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627979245312000