Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5800 87.8 2e-12 >seq5800 Length=2805 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 34626 GGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCA 34685 ||||||||||||||||||| || || || |||| |||| | ||| | |||||||| |||| Sbjct 2459 GGGAGCTGTCCTGCCAGCTGTACCAGCGGTCGGCAGACGTCGGGCTGGGGGTGCCCTTCA 2518 Query 34686 ACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 |||| || ||||| |||||||| |||| |||| || || Sbjct 2519 ACATCGCCTCGTACGCGCTGCTCACCATCATGCTCGCGCAGGT 2561 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || |||| |||| |||||||| ||||| || |||||||| |||||||| | | Sbjct 2561 ACCTGCGCGAGCATGATGGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAGC 2502 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCC 6719 || | |||| |||| || || || ||||||||||||||||||| Sbjct 2501 CCGACGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCC 2459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448224745958400