Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5800 104 2e-17 >seq5800 Length=2805 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29723 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGC 29782 || || || | |||| ||||| || | ||| ||||||||| ||||||||||| ||| Sbjct 2561 ACCTGCGCGAGCATGATGGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAGC 2502 Query 29783 CCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAAC 29842 || | ||| | |||| |||||| |||||||| || ||||| | |||||||||||||||| Sbjct 2501 CCGACGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCTGTCGCTCACGTAAAAC 2442 Query 29843 TG 29844 || Sbjct 2441 TG 2440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406129935233920