Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5800 89.7 4e-13 >seq5800 Length=2805 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27217 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 27276 || || || | |||| ||||| || | ||| ||||||||| ||||| ||||| ||| Sbjct 2561 ACCTGCGCGAGCATGATGGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACCCCCAGC 2502 Query 27277 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAAC 27336 || | ||| |||||| |||||| ||||| || || ||||| | ||||| ||||||||| Sbjct 2501 CCGACGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCTGTCGCTCACGTAAAAC 2442 Query 27337 TG 27338 || Sbjct 2441 TG 2440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369476937360320