Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 >seq1 Length=1096037 Score = 170 bits (188), Expect = 2e-37 Identities = 402/602 (67%), Gaps = 4/602 (1%) Strand=Plus/Minus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 |||||| || || || ||||| ||| ||||||| ||| || ||||||| ||| || Sbjct 961600 CTTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTGGACGAAATC 961541 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 || |||| |||| | | || |||| |||| |||| ||||||||||| || || Sbjct 961540 GCCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTACGACGCGAT 961481 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859 |||||| || || || || |||||||| | |||||||||||||| |||||| | || Sbjct 961480 GTTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCAGCTCAATTC 961421 Query 145860 CCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAG 145919 ||| || |||||||||||||| | | |||||| |||||||| ||||| | || Sbjct 961420 GCCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCATTTCCTTTAG 961361 Query 145920 GTCCGCCGGGTTCCAGGCGGTGAGGACGA-GCCTCCTGCTCTCGGGGTTCCTCTTGATCT 145978 | ||||| ||||| || || || | || || | | || || || ||||||||| Sbjct 961360 CGCTGCCGGATTCCATGCTGTAAGTAAGATGCGACGATCGGTC-GGATTATTCTTGATCT 961302 Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCC 146037 || | || | || || ||||||| ||| ||| || | | || | || | Sbjct 961301 TGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAGTC-GGCGTGCATGTTC 961243 Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGC 146097 ||| |||| || ||||| ||||| ||||| ||||| ||||| || || || || | Sbjct 961242 GTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATCACCCACC 961183 Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157 || | | || |||| | | | | || ||| |||||| |||||||||| Sbjct 961182 TCGCGCTCGGTCAACCCGATGGAGTCCAAATACTCTCGGCTTCCGTTGCCGTCCCAGATG 961123 Query 146158 TTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 |||| | || | | | || || | | || ||| | |||||| | |||| Sbjct 961122 TTGATCTTCTTCTCTGCCAACTTGTTCGCATTGGTCTCGCCCGCCACGAACCATAACAGC 961063 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGC 146277 || ||| ||| || | |||||| || | |||||| |||| || |||||| || ||| Sbjct 961062 TCCTCGGCGACGCCTCGCCAGAAAACACGCTTGGTCGTCAAGAGCGGGAACGAGCGACGC 961003 Query 146278 AG 146279 || Sbjct 961002 AG 961001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076652480800