Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 2e-37
>seq1
Length=1096037
Score = 170 bits (188), Expect = 2e-37
Identities = 402/602 (67%), Gaps = 4/602 (1%)
Strand=Plus/Minus
Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739
|||||| || || || ||||| ||| ||||||| ||| || ||||||| ||| ||
Sbjct 961600 CTTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTGGACGAAATC 961541
Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799
|| |||| |||| | | || |||| |||| |||| ||||||||||| || ||
Sbjct 961540 GCCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTACGACGCGAT 961481
Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859
|||||| || || || || |||||||| | |||||||||||||| |||||| | ||
Sbjct 961480 GTTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCAGCTCAATTC 961421
Query 145860 CCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAG 145919
||| || |||||||||||||| | | |||||| |||||||| ||||| | ||
Sbjct 961420 GCCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCATTTCCTTTAG 961361
Query 145920 GTCCGCCGGGTTCCAGGCGGTGAGGACGA-GCCTCCTGCTCTCGGGGTTCCTCTTGATCT 145978
| ||||| ||||| || || || | || || | | || || || |||||||||
Sbjct 961360 CGCTGCCGGATTCCATGCTGTAAGTAAGATGCGACGATCGGTC-GGATTATTCTTGATCT 961302
Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCC 146037
|| | || | || || ||||||| ||| ||| || | | || | || |
Sbjct 961301 TGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAGTC-GGCGTGCATGTTC 961243
Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGC 146097
||| |||| || ||||| ||||| ||||| ||||| ||||| || || || || |
Sbjct 961242 GTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATCACCCACC 961183
Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157
|| | | || |||| | | | | || ||| |||||| ||||||||||
Sbjct 961182 TCGCGCTCGGTCAACCCGATGGAGTCCAAATACTCTCGGCTTCCGTTGCCGTCCCAGATG 961123
Query 146158 TTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217
|||| | || | | | || || | | || ||| | |||||| | ||||
Sbjct 961122 TTGATCTTCTTCTCTGCCAACTTGTTCGCATTGGTCTCGCCCGCCACGAACCATAACAGC 961063
Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGC 146277
|| ||| ||| || | |||||| || | |||||| |||| || |||||| || |||
Sbjct 961062 TCCTCGGCGACGCCTCGCCAGAAAACACGCTTGGTCGTCAAGAGCGGGAACGAGCGACGC 961003
Query 146278 AG 146279
||
Sbjct 961002 AG 961001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076652480800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |