Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 7e-34
seq9 127 4e-24
>seq1
Length=1096037
Score = 159 bits (176), Expect = 7e-34
Identities = 419/636 (66%), Gaps = 15/636 (2%)
Strand=Plus/Plus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| || ||||| | ||| | ||||||||||| ||| || || | | ||
Sbjct 13803 GATTTCGATTACGACTACTTCGGGTTCAAAACGCTTGAGCGTTCCTACTTGTTGCGCATC 13862
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
|| |||||| |||| || || || || || | ||||| || | |||| || |||
Sbjct 13863 GACGGCAAGGTCGTCGAGCGTCCGCAACATTTGCTTATGCGTGTCTCCATCGGCATCCAC 13922
Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988
||| ||||| || | | | | || |||||| | |||| ||||| ||||||||
Sbjct 13923 AAGACCGACATCGAAAAGGCGATTGATACGTACCACATGCTGAGCGAACGATGGATGACG 13982
Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC----CGTCAACAATCAGCTGAGCTCGTG 249044
|| || | |||||| | |||||||| ||||| |||| ||||| |||||
Sbjct 13983 CACGCGTCGCCGACGTTGTTCAACGCTGGTACCCCGCGTC----CGCAGCTTTCTTCGTG 14038
Query 249045 CTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC 249104
||| | || |||| | || || || |||| |||||||| |||||||| || ||
Sbjct 14039 CTTCTTGATTTGCATGAAGGAAGATTCCATCGAGGGCATTTACGACACGCTGAAGGAGTG 14098
Query 249105 GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAA 249164
||| ||||| |||| || || || |||||| | ||| || | | |||||||| |
Sbjct 14099 CGCGTGTATTTCAAAATCTGCCGGAGGTATCGGTTTGTCCATCCACGATATCCGAGCTAC 14158
Query 249165 GGGTTCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGA 249222
| | || ||||| ||| || || || ||| | || ||| | || | || ||
Sbjct 14159 GAGCTCTTACATTCGAGGCACCAACGGAACGTC--GAACGGCATCATTCCGATGCTGCGT 14216
Query 249223 TGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCG---CCGAAAGGGGTCGTTC 249279
|| | ||| || | | | | |||| | || | || ||||| |||||
Sbjct 14217 GTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGGTGGTAAGCGCAAGGGAGCGTTC 14276
Query 249280 GCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAAC 249339
||||| || | || ||||||||| || || || || | || |||||| ||||||
Sbjct 14277 GCCATCTACCTCGAGCCGTGGCACGCAGACATCTTTGACTGGCTTGACTTGCGTAAGAAC 14336
Query 249340 AACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTG 249399
|||| || ||| | | ||||| || || ||||||||||||||| |||||||
Sbjct 14337 CACGGTAAGGAGGAAGCGCGCGCGCGCGATCTGTTCTACGGCCTGTGGACGAACGACTTG 14396
Query 249400 TTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACG 249435
|| ||| |||||| |||| ||||||| ||||||
Sbjct 14397 TTTATGAAGCGCGTCGAGGCGAACGGCGAATGGACG 14432
>seq9
Length=713054
Score = 127 bits (140), Expect = 4e-24
Identities = 150/201 (75%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 254205 CCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCC 254264
||||| | ||| | |||| | ||||||||||| |||||||| | ||||||||||||
Sbjct 145450 CCGCCGTATAAGATTTTGATTTTAGACGAGGCGGATGCCATGACGACGGACGCGCAGTCC 145391
Query 254265 GCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAAC 254324
||| | || ||| |||||||||| ||||| || || || || | || ||||||||
Sbjct 145390 GCCATGCGAAGAATGATGGAGACGTACTCCAAGGTCACTCGATTCTTTCTCTTGTGCAAC 145331
Query 254325 TACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACC 254384
|||||| |||| ||||||| ||| | | |||||||||||||||| | ||| || |
Sbjct 145330 TACGTGACGAAAATCATCGATCCGATCACGAGTCGGTGCGCCAAGTTTAGGTTC--CAAC 145273
Query 254385 CTCGCGCCC--AAGTCGATGA 254403
| | ||||| || ||||||
Sbjct 145272 CGCTCGCCCTGGAGACGATGA 145252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766124847360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |