Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 159 7e-34 seq9 127 4e-24 >seq1 Length=1096037 Score = 159 bits (176), Expect = 7e-34 Identities = 419/636 (66%), Gaps = 15/636 (2%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || ||||| | ||| | ||||||||||| ||| || || | | || Sbjct 13803 GATTTCGATTACGACTACTTCGGGTTCAAAACGCTTGAGCGTTCCTACTTGTTGCGCATC 13862 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 || |||||| |||| || || || || || | ||||| || | |||| || ||| Sbjct 13863 GACGGCAAGGTCGTCGAGCGTCCGCAACATTTGCTTATGCGTGTCTCCATCGGCATCCAC 13922 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 ||| ||||| || | | | | || |||||| | |||| ||||| |||||||| Sbjct 13923 AAGACCGACATCGAAAAGGCGATTGATACGTACCACATGCTGAGCGAACGATGGATGACG 13982 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC----CGTCAACAATCAGCTGAGCTCGTG 249044 || || | |||||| | |||||||| ||||| |||| ||||| ||||| Sbjct 13983 CACGCGTCGCCGACGTTGTTCAACGCTGGTACCCCGCGTC----CGCAGCTTTCTTCGTG 14038 Query 249045 CTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC 249104 ||| | || |||| | || || || |||| |||||||| |||||||| || || Sbjct 14039 CTTCTTGATTTGCATGAAGGAAGATTCCATCGAGGGCATTTACGACACGCTGAAGGAGTG 14098 Query 249105 GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAA 249164 ||| ||||| |||| || || || |||||| | ||| || | | |||||||| | Sbjct 14099 CGCGTGTATTTCAAAATCTGCCGGAGGTATCGGTTTGTCCATCCACGATATCCGAGCTAC 14158 Query 249165 GGGTTCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGA 249222 | | || ||||| ||| || || || ||| | || ||| | || | || || Sbjct 14159 GAGCTCTTACATTCGAGGCACCAACGGAACGTC--GAACGGCATCATTCCGATGCTGCGT 14216 Query 249223 TGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCG---CCGAAAGGGGTCGTTC 249279 || | ||| || | | | | |||| | || | || ||||| ||||| Sbjct 14217 GTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGGTGGTAAGCGCAAGGGAGCGTTC 14276 Query 249280 GCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAAC 249339 ||||| || | || ||||||||| || || || || | || |||||| |||||| Sbjct 14277 GCCATCTACCTCGAGCCGTGGCACGCAGACATCTTTGACTGGCTTGACTTGCGTAAGAAC 14336 Query 249340 AACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTG 249399 |||| || ||| | | ||||| || || ||||||||||||||| ||||||| Sbjct 14337 CACGGTAAGGAGGAAGCGCGCGCGCGCGATCTGTTCTACGGCCTGTGGACGAACGACTTG 14396 Query 249400 TTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACG 249435 || ||| |||||| |||| ||||||| |||||| Sbjct 14397 TTTATGAAGCGCGTCGAGGCGAACGGCGAATGGACG 14432 >seq9 Length=713054 Score = 127 bits (140), Expect = 4e-24 Identities = 150/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 254205 CCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCC 254264 ||||| | ||| | |||| | ||||||||||| |||||||| | |||||||||||| Sbjct 145450 CCGCCGTATAAGATTTTGATTTTAGACGAGGCGGATGCCATGACGACGGACGCGCAGTCC 145391 Query 254265 GCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAAC 254324 ||| | || ||| |||||||||| ||||| || || || || | || |||||||| Sbjct 145390 GCCATGCGAAGAATGATGGAGACGTACTCCAAGGTCACTCGATTCTTTCTCTTGTGCAAC 145331 Query 254325 TACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACC 254384 |||||| |||| ||||||| ||| | | |||||||||||||||| | ||| || | Sbjct 145330 TACGTGACGAAAATCATCGATCCGATCACGAGTCGGTGCGCCAAGTTTAGGTTC--CAAC 145273 Query 254385 CTCGCGCCC--AAGTCGATGA 254403 | | ||||| || |||||| Sbjct 145272 CGCTCGCCCTGGAGACGATGA 145252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766124847360