Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq12 123 4e-23 >seq12 Length=542657 Score = 123 bits (136), Expect = 4e-23 Identities = 371/562 (66%), Gaps = 12/562 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| ||| || ||||| |||||||||| || ||||||| || || || |||||||| | Sbjct 198027 ACAGCAAGCAAGCGAAGTCGCAGTGCAAGCCTTCGTCTCGGCTGATGAGCTCGTTGGAGA 198086 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | || | ||| |||| | || |||||||| ||||| || |||| |||| ||||||||| Sbjct 198087 AGGTTAAACCGCGCATCAATCCTCGCTTTTTCAGCCAGAAGATGG-CGCAGAATGACCCA 198145 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||||||||| || || || | || || || || | | || ||| | Sbjct 198146 CTGAAGAAGATTCCTTCGACGCACGCGAATCCCACCAGCCTTTCGGCGAAGCTCGCGTCG 198205 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 | ||||| | | ||||| || || ||| | ||| |||| || | ||| Sbjct 198206 CTACCGATCCAATGAAGCGCCCAGTCTGCTTTCATCGCCACAGTCGGCACTGTGTGAATG 198265 Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG--AC 50248 || ||| | | | ||| | || ||| || | || || || |||||| | Sbjct 198266 GCGCGAAACAATTCGGATTTCTTCTTCGGATCCTTGATGTACGTGTC---CAAAAGCAGC 198322 Query 50249 TA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 | ||||| || |||||||| || || || | |||||||||||||| ||| ||| Sbjct 198323 GAGTACATCTCGCTGTGAATGTTCTCGATCGCGAGTTGAAATCCGTAGAACGATCGCGCC 198382 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGC-TAAATTTTCATTCACTATTCCGTC 50366 || | || |||||| || | ||||| ||| | ||| || || || ||||| Sbjct 198383 TCTGGAAGCTGCACGTCGCTCATGAATCG-CGAGCACAGATTCTCGAGAACAATGCCGTC 198441 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTT 50426 || | || ||||||||||| || || | || || || ||||| | || | Sbjct 198442 GCTCGAGGCGAAAAACGCCAACACGTGAGACACGAAGTGCTTCTCGTTCTCGTTCAGCGT 198501 Query 50427 ATTCCAATCATTGATA-TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | |||||| || ||| || | | | ||| || || ||| | |||||||| |||| Sbjct 198502 CTGCCAATCCTT-ATAGTCGTACGTCAAATCAACCTCCTCCGCCGTCCAAAAGCTCGCCT 198560 Query 50486 CTGCCTTTTTATACATATTCCA 50507 | ||||| |||||||| | ||| Sbjct 198561 CCGCCTTCTTATACATCTCCCA 198582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268620432800