Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 2e-16
seq20 89.7 4e-13
>seq8
Length=717457
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||||||| | ||||||| ||| | ||||||||||||||| || ||||||||||||
Sbjct 310648 CCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCC 310589
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| || | ||||||| ||||| || ||||| |||| | | ||||||||| ||
Sbjct 310588 AACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGG 310529
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGG-CTCCGT 18993
| |||||| || || || ||| || || | | ||| || || | ||| ||||
Sbjct 310528 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTC-CGAGGACTCCAC 310470
Query 18994 TTCGACGGTAATGGTTTTACCTGT 19017
|| | ||| ||||| ||||| ||
Sbjct 310469 CTCCAAGGTGATGGTCTTACCAGT 310446
>seq20
Length=165357
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/140 (76%), Gaps = 8/140 (6%)
Strand=Plus/Plus
Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGC-GTCGGGAGCGCCGTGAT---TTT 21193
|||||| || |||||||| |||| ||| | || | ||||| |||||||||| | |
Sbjct 75706 GACGTTTCCGAGATCGCCCGCGTGTCGCACCGCATCCGTCGGC-GCGCCGTGATCCATCT 75764
Query 21194 GGTGCGTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACT 21253
|| || ||||||||||| || | |||| |||| ||||| ||||||| |||||||
Sbjct 75765 TGTTCG---GGTTAAAGTGCGGTCCCGTGGACATGCACCCGTTCGTGGTGTCACCGAACT 75821
Query 21254 CGTGAACGTGAAAGCCGTGC 21273
|||||| ||| || ||||||
Sbjct 75822 CGTGAATGTGCAAACCGTGC 75841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414572698947880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |