Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 9e-39
seq11 167 4e-37
>seq1
Length=1096037
Score = 172 bits (190), Expect = 9e-39
Identities = 186/244 (76%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| | || ||||| || ||||| ||||| ||||| ||||| || |
Sbjct 1039432 CGCCAAGCGTCACCGCAAGGTC-CTTCGCGACAACATTCAAGGCATCACGAAGCCGGCGA 1039374
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||||| |||||||| |||||||| ||||||| | |||| |||||||
Sbjct 1039373 TCCGACGCTTGGCTCGCCGTGGTGGTGTCAAGCGCATCTCTGGTCTCATCTACGAAGAGA 1039314
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| | |||||| ||| ||| |||| |||||| | ||| ||||
Sbjct 1039313 CCCGAGGCGTCCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTGACCTACACCG 1039254
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||| | ||||| |||||| |||||||| ||||||| || | || || ||||
Sbjct 1039253 AGCACGCTCGCAGAAAGACGGTCACCGCCATGGATGTCGTCTACGCGCTCAAGCGCCAAG 1039194
Query 16671 GCCG 16674
||||
Sbjct 1039193 GCCG 1039190
Score = 172 bits (190), Expect = 9e-39
Identities = 186/244 (76%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| | || ||||| || ||||| ||||| ||||| ||||| || |
Sbjct 1039837 CGCCAAGCGTCACCGCAAGGTC-CTTCGCGACAACATTCAAGGCATCACGAAGCCGGCGA 1039895
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||||| |||||||| |||||||| ||||||| | |||| |||||||
Sbjct 1039896 TCCGACGCTTGGCTCGCCGTGGTGGTGTCAAGCGCATCTCTGGTCTCATCTACGAAGAGA 1039955
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| | |||||| ||| ||| |||| |||||| | ||| ||||
Sbjct 1039956 CCCGAGGCGTCCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTGACCTACACCG 1040015
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||| | ||||| |||||| |||||||| ||||||| || | || || ||||
Sbjct 1040016 AGCACGCTCGCAGAAAGACGGTCACCGCCATGGATGTCGTCTACGCGCTCAAGCGCCAAG 1040075
Query 16671 GCCG 16674
||||
Sbjct 1040076 GCCG 1040079
>seq11
Length=595839
Score = 167 bits (184), Expect = 4e-37
Identities = 185/244 (76%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| | || ||||| || ||||| ||||| ||||| ||||| || |
Sbjct 406002 CGCCAAGCGTCACCGCAAGGTC-CTTCGCGACAACATTCAAGGCATCACGAAGCCGGCGA 406060
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||||| |||||||| |||||||| |||| || | |||| |||||||
Sbjct 406061 TCCGACGCTTGGCTCGCCGTGGTGGTGTCAAGCGCATCTCCGGTCTCATCTACGAAGAGA 406120
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| | |||||| ||| ||| |||| |||||| | ||| ||||
Sbjct 406121 CCCGAGGCGTCCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTGACCTACACCG 406180
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||| | ||||| |||||| |||||||| ||||||| || | || || ||||
Sbjct 406181 AGCACGCTCGCAGAAAGACGGTCACCGCCATGGATGTCGTCTACGCGCTCAAGCGCCAAG 406240
Query 16671 GCCG 16674
||||
Sbjct 406241 GCCG 406244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075181713860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |