Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 8e-18
>seq12
Length=542657
Score = 105 bits (116), Expect = 8e-18
Identities = 367/562 (65%), Gaps = 12/562 (2%)
Strand=Plus/Plus
Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355
||| ||| || ||||| |||||||||| || ||||||| || || || |||||||| |
Sbjct 198027 ACAGCAAGCAAGCGAAGTCGCAGTGCAAGCCTTCGTCTCGGCTGATGAGCTCGTTGGAGA 198086
Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415
| || | ||| |||| | || |||||||| ||||| || |||| |||||| |||
Sbjct 198087 AGGTTAAACCGCGCATCAATCCTCGCTTTTTCAGCCAGAAGATGGCGCAGAATGACCCAC 198146
Query 33416 AAAAGAAGATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 33474
|||||||||||||| || ||| || || | | || || || | | | ||| |
Sbjct 198147 TGAAGAAGATTCCTTCGAC-GCACGCGAATCCCACCAGCCTTTCGGCGAAGCTCGCGTCG 198205
Query 33475 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534
| ||||| | | ||||| || || ||| | ||| |||| || | |||
Sbjct 198206 CTACCGATCCAATGAAGCGCCCAGTCTGCTTTCATCGCCACAGTCGGCACTGTGTGAATG 198265
Query 33535 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG--AC 33592
|| ||| | | | ||| | || ||| || | || || || |||||| |
Sbjct 198266 GCGCGAAACAATTCGGATTTCTTCTTCGGATCCTTGATGTACGTGTC---CAAAAGCAGC 198322
Query 33593 TA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33651
| ||||| || |||||||| || || || | |||||||||||||| ||| |||
Sbjct 198323 GAGTACATCTCGCTGTGAATGTTCTCGATCGCGAGTTGAAATCCGTAGAACGATCGCGCC 198382
Query 33652 TCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCA 33711
|| | || ||| || || | ||||| || ||| || || || |||||
Sbjct 198383 TCTGGAAGCTGCACGTCGCTCATGAATCGCGAGCACAGATTCTCGAGAACAATGCCGTCG 198442
Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGTTT 33770
|| | || ||||||||||| || || | || | || ||| ||| || | || |
Sbjct 198443 CTCGAGGCGAAAAACGCCAACACGTGAGACACGAAGTGCTTCTCGTTCTCGT-TCAGCGT 198501
Query 33771 ATTCCAATCATTGATA-TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 33829
| |||||| || ||| || | | | ||| || || ||| | |||||||| ||||
Sbjct 198502 CTGCCAATCCTT-ATAGTCGTACGTCAAATCAACCTCCTCCGCCGTCCAAAAGCTCGCCT 198560
Query 33830 CTGCCTTTTTATACATGTTCCA 33851
| ||||| |||||||| | |||
Sbjct 198561 CCGCCTTCTTATACATCTCCCA 198582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947044263200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |