Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 150 2e-31 seq13 84.2 2e-11 >seq3 Length=997348 Score = 150 bits (166), Expect = 2e-31 Identities = 196/271 (72%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 71668 TCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAAT 71727 ||||||||| || || | ||||| || || |||||| | | ||| ||| ||| || || Sbjct 935087 TCAAACGCACGACGATTTGTGGAACGCGGCGCAGCGAGAATTGCGCTATGGGGGCAAGAT 935028 Query 71728 TCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGA 71787 ||||| | | ||||||||||||||||| ||||| || |||||||| | | ||||| Sbjct 935027 GCACGGCTTCTGCCGCATGTACTGGGCCAAGAAGATCCTGGAGTGGACCGAGTCCCCCGA 934968 Query 71788 GCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCC 71847 || |||||| ||| || || || || || || | || ||| |||||||||||||| Sbjct 934967 ACAAGCGCTCAAGTGGTCCATCTACCTGAATGACACGTATTCTCTTGACGGTCGCGATCC 934908 Query 71848 TAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGA 71907 | ||| |||||||| ||||||||| ||| |||| ||||||| | | | ||| Sbjct 934907 GAGCGGGTATGTCGGCTGCATGTGGTCCATCGTCGGTGTTCACGACCAAGGTTGGAAAGA 934848 Query 71908 ACGTCAAGTGTTTGGTAAAATTCGCTATATG 71938 || | || || ||||| ||||| || ||| Sbjct 934847 GCGCGAGGTTTTCGGTAAGATTCGTTACATG 934817 >seq13 Length=549623 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 ||||| || ||||||||||| || || || | |||| || || | || ||| Sbjct 291931 ACGCACGACGAACTATGGAACGCGGCGCAAAAAGAGCTGTATCATCTAGGAAGGATGCAC 291990 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 |||| | | | ||||||||||| || ||||| ||||||||||| | |||| || Sbjct 291991 GGATTCATGAGAATGTACTGGGCAAAGAAGATACTCGAGTGGACGCCGTCTCCGGAAATT 292050 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 ||||| ||| | || | || ||||| | || | | ||||| | |||||| ||| Sbjct 292051 GCGCTTGAGACAGCCATCCAACTCAACGACACGTATGCTTTAGACGGACTCGATCCGAAC 292110 Query 71852 GGTTATGTCGGTTGCATGTGG 71872 || || ||||| ||||||||| Sbjct 292111 GGCTACGTCGGATGCATGTGG 292131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662280334400