Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 161 9e-35 seq12 152 5e-32 seq8 109 5e-19 seq7 100 3e-16 >seq1 Length=1096037 Score = 161 bits (178), Expect = 9e-35 Identities = 578/880 (66%), Gaps = 49/880 (6%) Strand=Plus/Minus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCG-TCGCTGTATTGTACGATCTC 145683 ||||| || ||||| || || || || || || || | | ||| |||| | || ||||| Sbjct 14734 GCGATGGAAGCCAAGTTGCACACGGCGGTTTCATCCGGGCTCG-TGTACTCAACAATCTC 14676 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCA 145743 | |||||| ||| | ||||| || || || ||||| || ||| || | |||||| Sbjct 14675 TGTGCACAAGTTGGAGGACTTGATCGTGCCGAGGTTTTGTTGGTTAGACTTGCGGTTGCA 14616 Query 145744 CGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAA 145801 ||| ||||| |||||||||| || || ||||| || || | ||| | ||| ||| Sbjct 14615 CGCATCCTTAAAGAGCATGTATGGGTTACCGGTCTCAACTTGGGACTCGAGGATGGCAAA 14556 Query 145802 CGGTGCAAGTCCT-GCGCACGCACCTGCTGCTGGTAGCGG--CCCTCTTCTTCGTA--TT 145856 | |||| | | || | || || || | ||||| ||||||| || Sbjct 14555 CCA---AAGTTGTTGAGCCTTGATGGTCTTCT--TACCCTTACCCTCCGCTTCGTACTTT 14501 Query 145857 TCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGG 145916 || | |||| | || || | ||| |||| || |||| || || |||| ||| | Sbjct 14500 TCATACAGAGTT--TCGAATTCCTCACCCCAGCAGTCAGACAATCCAGGGCACTCGTTCG 14443 Query 145917 GACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCC 145976 | ||||||| || |||| ||||||| || | |||||||| ||||||||| || | || Sbjct 14442 GGCACATCAACGTCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTCGTTCGTCC 14383 Query 145977 ACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTT---CA 146033 |||| |||| | || |||||||| ||||| ||| ||| ||| || Sbjct 14382 ACAGGCCGTAGAACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTT---CTTACGCA 14326 Query 146034 AATTAAGCACACT-ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCT 146092 | | |||| || | | ||||||| ||||||||||| || | |||| ||||| ||||| Sbjct 14325 AGTCAAGC-CAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGCTCCC 14267 Query 146093 TTTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATG 146149 || || || ||||| |||||||||| || || ||| ||| || || |||| ||| Sbjct 14266 TTGCGCTTACCACCACCTTGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATC 14207 Query 146150 GGCTCGACGCCGCTGGCTACG--CCGTT----CGTAGAGTTTA--TTCTGGTGCCGCGGG 146201 || || |||| | | ||| ||||| | | || | || || || | | || Sbjct 14206 GGAATGATGCCGTT--CGACGTTCCGTTGGTGCCTCGAATGTAAGAGCTCGTAGCTC-GG 14150 Query 146202 AGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGT 146261 | | | | || || |||| ||| ||| | | || || ||| ||||| | Sbjct 14149 ATATCGTGGATGGA-----CAAACCGATACCTCCGGCAGATTTTGAAATACACGCGCACT 14095 Query 146262 CGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAATGCCGAGCAGAAAGCA 146319 | ||||| ||||| ||||| || ||| ||| |||| |||| | || ||||| Sbjct 14094 CCTTCAGCGTGTCGTAAATGCCCTCGATGGAATCTTCCTTC--ATGCAAATCAAGAAGCA 14037 Query 146320 CGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AA 146378 ||| | | ||||| ||| || || || |||||||||||| ||||||||| | Sbjct 14036 CGAAGAAAGCTGCGGACGCGGGGTACCAGCGTTGAACAACGTCGGCGACGCGTGCGTCAT 13977 Query 146379 ACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAA 146438 ||| ||| ||||| ||| | ||||| || || || | || |||||| || | Sbjct 13976 CCATCGTTC-GCTCAGCATGTGGTACGTATCAATCGCCTTTTCGATGTCGGTCTTGTGGA 13918 Query 146439 TGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTC 146478 |||| | | ||| ||||| |||| ||||| || ||||| Sbjct 13917 TGCCGATGGAGACACGCATAAGCAAATGTTGCGGACGCTC 13878 >seq12 Length=542657 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| || ||||| || || | || |||||||| || |||||||| ||| Sbjct 189573 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189514 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| |||||||| || ||| |||| ||||| ||||| ||||| || Sbjct 189513 CAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 189454 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| ||| ||||| | || | || || | |||||| | Sbjct 189453 GATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 189394 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| ||| ||||| || || || || ||||| || |||||| Sbjct 189393 TTCGAGCGTAATGGTCTTACCCGTGAGCGTCTTCACGAAGATTTGCATG 189345 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| || ||||| || || | || |||||||| || |||||||| ||| Sbjct 189801 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189742 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| |||||||| || ||| |||| ||||| ||||| ||||| || Sbjct 189741 CAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 189682 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| ||| ||||| | || | || || | |||||| | Sbjct 189681 GATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 189622 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| ||| ||||| || || || || ||||| || |||||| Sbjct 189621 TTCGAGCGTAATGGTCTTACCCGTGAGCGTCTTCACGAAGATTTGCATG 189573 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| || ||||| || || | || |||||||| || |||||||| ||| Sbjct 189345 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189286 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| |||||||| || ||| |||| ||||| ||||| ||||| || Sbjct 189285 CAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 189226 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| ||| ||||| | || | || || | |||||| | Sbjct 189225 GATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 189166 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| ||| || || || || || || ||||| || |||||| Sbjct 189165 TTCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTCACGAAGATTTGCATG 189117 Score = 104 bits (114), Expect = 2e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| || ||||| || || | || |||||||| || |||||||| ||| Sbjct 189117 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189058 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || ||| |||| ||||| ||||| ||||| || Sbjct 189057 CAAAGTGCGACCATCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 188998 Query 131127 GATTCCT 131133 ||| ||| Sbjct 188997 GATCCCT 188991 >seq8 Length=717457 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| |||| ||| || || | || ||||||||||| ||||||||||| | Sbjct 310648 CCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCC 310589 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| | || ||||| ||||| ||||| ||| Sbjct 310588 AACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGG 310529 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| ||| | | || | || || | |||||| | Sbjct 310528 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 310469 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| ||||| || Sbjct 310468 TCCAAGGTGATGGTCTTACCAGT 310446 >seq7 Length=770246 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || |||||||| |||| ||| || || | || ||||||||||| |||||||| ||| Sbjct 134647 CCCCCGCGCAAGCGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCG 134588 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| || ||||| || ||| |||| | ||| ||||| ||||| ||| Sbjct 134587 AGCGTGCGGCCGTCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGG 134528 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| ||| | | || | || || | |||||| | Sbjct 134527 ATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 134468 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| ||||| || Sbjct 134467 TCCAAGGTGATGGTCTTACCCGT 134445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012681996800