Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq15 109 1e-18
seq6 102 2e-16
>seq15
Length=511330
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764
|| |||||||| |||||||||||||| || ||| | |||||||| || || || ||
Sbjct 117690 CTCTCGGGTGGCTGGAAGATGAAGCTCGCGCTCGCCCGCGCCATCCTCATGAAGGCTGAC 117631
Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824
|| | |||| |||||||| || |||||| ||||| || ||||| |||||| | |
Sbjct 117630 ATCTTGTTGCTCGATGAGCCGACGAACCACTTGGACGTCAAGAACGTCGCCTGGTTGGAA 117571
Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884
||||| | | | | | | || |||||| | ||||| || ||||||||||| |||
Sbjct 117570 GAGTACCTCAACTCGCAAACGCAAGTCTCTTCCATGATTGTGTCCCACGACTCTGGTTTC 117511
Query 279885 CTAGATGCCGTGTGCTCTGCCATCATTCACTATGA 279919
| || |||||| | |||||| ||||| ||
Sbjct 117510 TTGGACCGCGTGTGTACGCACATCATCCACTACGA 117476
Score = 105 bits (116), Expect = 1e-17
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238
||||| || |||||||||||||| || | |||||| |||| ||||| ||| | || |
Sbjct 117216 GGACCGAACGGTGCGGGTAAGTCCACGTTCATCAAACTCCTCACTGGTGAGGCTGAGCCG 117157
Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298
| || |||| ||| || || || ||||| || |||||||| ||||||||
Sbjct 117156 GACCAAGGTACCGTCTGGCGTCACCCGAATATGCGCTACGCGTACGTCGCGCAGCACGCG 117097
Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354
||||||||| ||||| | ||| |||||| ||| || ||| | ||||| | |||||
Sbjct 117096 TTCCACCACGTCGAGCAGCACTTGGACAAGACGCCCAACGAGTACATCCGATGGCG 117041
>seq6
Length=793623
Score = 102 bits (112), Expect = 2e-16
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 280242 GAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301
||||| | |||||||||||||| ||| || |||| |||||||| ||||||||||||
Sbjct 618111 GAGGGTACGGTTTGGAAGCATCCAAACGCCCGAGTGGCGTACGTCGCCCAGCACGCTTTC 618170
Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357
|||||||| || | ||||| |||| ||| || || ||||||||| ||||| ||
Sbjct 618171 CACCACATTGAACAACACCTCGACAAGACGCCGAATGAATACATTCGCTGGCGTTA 618226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836536616820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |