Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq15 109 1e-18 seq6 102 2e-16 >seq15 Length=511330 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || |||||||| |||||||||||||| || ||| | |||||||| || || || || Sbjct 117690 CTCTCGGGTGGCTGGAAGATGAAGCTCGCGCTCGCCCGCGCCATCCTCATGAAGGCTGAC 117631 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 || | |||| |||||||| || |||||| ||||| || ||||| |||||| | | Sbjct 117630 ATCTTGTTGCTCGATGAGCCGACGAACCACTTGGACGTCAAGAACGTCGCCTGGTTGGAA 117571 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 ||||| | | | | | | || |||||| | ||||| || ||||||||||| ||| Sbjct 117570 GAGTACCTCAACTCGCAAACGCAAGTCTCTTCCATGATTGTGTCCCACGACTCTGGTTTC 117511 Query 279885 CTAGATGCCGTGTGCTCTGCCATCATTCACTATGA 279919 | || |||||| | |||||| ||||| || Sbjct 117510 TTGGACCGCGTGTGTACGCACATCATCCACTACGA 117476 Score = 105 bits (116), Expect = 1e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 ||||| || |||||||||||||| || | |||||| |||| ||||| ||| | || | Sbjct 117216 GGACCGAACGGTGCGGGTAAGTCCACGTTCATCAAACTCCTCACTGGTGAGGCTGAGCCG 117157 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 | || |||| ||| || || || ||||| || |||||||| |||||||| Sbjct 117156 GACCAAGGTACCGTCTGGCGTCACCCGAATATGCGCTACGCGTACGTCGCGCAGCACGCG 117097 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||||||||| ||||| | ||| |||||| ||| || ||| | ||||| | ||||| Sbjct 117096 TTCCACCACGTCGAGCAGCACTTGGACAAGACGCCCAACGAGTACATCCGATGGCG 117041 >seq6 Length=793623 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 280242 GAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301 ||||| | |||||||||||||| ||| || |||| |||||||| |||||||||||| Sbjct 618111 GAGGGTACGGTTTGGAAGCATCCAAACGCCCGAGTGGCGTACGTCGCCCAGCACGCTTTC 618170 Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||| || | ||||| |||| ||| || || ||||||||| ||||| || Sbjct 618171 CACCACATTGAACAACACCTCGACAAGACGCCGAATGAATACATTCGCTGGCGTTA 618226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836536616820