Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 264 1e-65 >seq1 Length=1096037 Score = 264 bits (292), Expect = 1e-65 Identities = 619/926 (67%), Gaps = 6/926 (1%) Strand=Plus/Plus Query 93716 ATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCA 93775 ||||||| ||||| | |||||||| || ||| || ||| | | || || |||| Sbjct 13810 ATTACGACTACTTCGGGTTCAAAACGCTTGAGCGTTCCTACTTGTTGCGCATCGACGGCA 13869 Query 93776 GGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACG 93835 ||| |||||| ||||| || |||| ||||| ||| ||||||| || ||| || Sbjct 13870 AGGTCGTCGAGCGTCCGCAACATTTGCTTATGCGTGTCTCCATCGGCATCCACAAGACCG 13929 Query 93836 ACATGCCGAATGTT-TTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT-ACCATGGC 93893 |||| || | ||| | || | | || | || | || | || || || Sbjct 13930 ACATCGAAAAGGCGATTGATACGTACCACATGC-TGAGCGA-ACGATGGATGACGCACGC 13987 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | ||||| |||||||||| || |||||| || ||| | |||||||| ||| |||| Sbjct 13988 GTCGCCGACGTTGTTCAACGCTGGTACCCCGCGTCCGCAGCTTTCTTCGTGCTTCTTGAT 14047 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | |||| || |||||| || |||| ||||| || ||||| || ||| || Sbjct 14048 TTGCATGAAGGAAGATTCCATCGAGGGCATTTACGACACGCTGAAGGAGTGCGCGTGTAT 14107 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||||||| || || || ||||| | ||||||| | || || | | | || || Sbjct 14108 TTCAAAATCTGCCGGAGGTATCGGTTTGTCCATCCACGATATCCGAGCTACGAGCTCTTA 14167 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || || ||||| || || || |||||| || | || ||||| || || |||||| | Sbjct 14168 CATTCGAGGCACCAACGGAACGTCGAACGGCATCATTCCGATGCTGCGTGTGTTCAACGA 14227 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| |||||||||||||| |||||||| | | | ||||| | ||||| |||| || Sbjct 14228 CACGGCTCGCTACGTGGACCAAGGTGGTGGTAAGCGCAAGGGAGCGTTCGCCATCTACCT 14287 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| |||||||| ||| | | | | ||| |||| ||||||||||| || || Sbjct 14288 CGAGCCGTGGCACGCAGACATCTTTGACTGGCTTGACTTGCGTAAGAACCACGGTAAGGA 14347 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | | || | || || ||||||| || ||| | ||| | |||||||| || Sbjct 14348 GGAAGCGCGCGCGCGCGATCTGTTCTACGGCCTGTGGACGAACGACTTGTTTATGAAGCG 14407 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 ||||||| ||| || |||| | | || || || || || || ||| |||| || Sbjct 14408 CGTCGAGGCGAACGGCGAATGGACGTTGATGTGCCCGAACGAGTGCCCTGGATTGTCTGA 14467 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || || | || ||| ||| |||||| |||||| || |||| |||| | Sbjct 14468 CTGCTGGGGTGAGGAATTCGAA-ACTCTGTATGAAAAGTACGAAGCGGAGGGTAAGGGTA 14526 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 |||| || | ||| | || ||| | ||| | || || || ||||| | Sbjct 14527 AGAAGACCATCAAGGCTCAACAACTTTGGTTTGCCATCCTCGAGTCCCAAGTTGAGACCG 14586 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 ||| || ||||| | || ||||| | |||| |||||| ||||| || |||||| Sbjct 14587 GTAACCCATACATGCTCTTTAAGGATGCGTGCAACCGCAAGTCTAACCAACAAAACCTCG 14646 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||||||| ||| || ||||||| |||||||| ||||| || ||||| || | Sbjct 14647 GCACGATCAAGTCCTCCAACTTGTGCACAGAGATTGTTGAGTACACGAGCCCGGATGAAA 14706 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATC 94638 || ||||| ||| ||| |||||| Sbjct 14707 CCGCCGTGTGCAACTTGGCTTCCATC 14732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723076319200