Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 125 7e-24 seq7 107 2e-18 >seq8 Length=717457 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || ||||||||||| || | ||||||||| ||||| || |||||||| || Sbjct 310648 CCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCC 310589 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| | ||||| || |||||||| || || Sbjct 310588 AACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGG 310529 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||| || ||| ||| ||| | |||| |||| |||||||| ||| || Sbjct 310528 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCAC 310470 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091 || | ||| | || || || |||| Sbjct 310469 CTCCAAGGTGATGGTCTTACCAGTCA 310444 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 8/230 (3%) Strand=Plus/Minus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 ||||||| || | || |||| |||||| | ||| |||| || | | || | Sbjct 89926 CCGAAGCGGTTGAGATCGAGAAGGAGTTCGTGTGCGACTCTCTTCCGTGCGCGCTCGTTG 89867 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||||| | |||||||| | ||||| |||| |||||||||| | || ||| Sbjct 89866 GTATGAACGCCGGTATGATGAGCGACTACATTGAATACGTCGCCGACCACTTG----TTC 89811 Query 47473 AGCTAAA---GTAT-CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAAC 47528 | || |||| |||||| ||| |||| | ||| || || || | ||| | | Sbjct 89810 ACCTCCCTTGGTATGCCCAAGGAGTACAACACGGCGAACCCGTTTGACTGGATGGAACTC 89751 Query 47529 ATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 || |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct 89750 ATCTCGCTCCAAGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAATA 89701 >seq7 Length=770246 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| || ||||||||||| || | ||| ||||| ||||| || ||||| ||| | Sbjct 134647 CCCCCGCGCAAGCGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCG 134588 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || || || || || ||| |||||| || |||||||| || || Sbjct 134587 AGCGTGCGGCCGTCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGG 134528 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| || ||| ||| ||| | |||| |||| |||||||| ||| || Sbjct 134527 ATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCAC 134469 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091 || | ||| | || || || |||| Sbjct 134468 CTCCAAGGTGATGGTCTTACCCGTCA 134443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500681124800