Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 7e-24
seq7 107 2e-18
>seq8
Length=717457
Score = 125 bits (138), Expect = 7e-24
Identities = 153/206 (74%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || ||||||||||| || | ||||||||| ||||| || |||||||| ||
Sbjct 310648 CCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCC 310589
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| | ||||| || |||||||| || ||
Sbjct 310588 AACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGG 310529
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||| || ||| ||| ||| | |||| |||| |||||||| ||| ||
Sbjct 310528 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCAC 310470
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091
|| | ||| | || || || ||||
Sbjct 310469 CTCCAAGGTGATGGTCTTACCAGTCA 310444
Score = 107 bits (118), Expect = 2e-18
Identities = 163/230 (71%), Gaps = 8/230 (3%)
Strand=Plus/Minus
Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412
||||||| || | || |||| |||||| | ||| |||| || | | || |
Sbjct 89926 CCGAAGCGGTTGAGATCGAGAAGGAGTTCGTGTGCGACTCTCTTCCGTGCGCGCTCGTTG 89867
Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472
| |||||||| | |||||||| | ||||| |||| |||||||||| | || |||
Sbjct 89866 GTATGAACGCCGGTATGATGAGCGACTACATTGAATACGTCGCCGACCACTTG----TTC 89811
Query 47473 AGCTAAA---GTAT-CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAAC 47528
| || |||| |||||| ||| |||| | ||| || || || | ||| | |
Sbjct 89810 ACCTCCCTTGGTATGCCCAAGGAGTACAACACGGCGAACCCGTTTGACTGGATGGAACTC 89751
Query 47529 ATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
|| |||||| | |||||||||||||| |||||||||||||||||||||||
Sbjct 89750 ATCTCGCTCCAAGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAATA 89701
>seq7
Length=770246
Score = 107 bits (118), Expect = 2e-18
Identities = 149/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| || ||||||||||| || | ||| ||||| ||||| || ||||| ||| |
Sbjct 134647 CCCCCGCGCAAGCGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCG 134588
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || || || || || ||| |||||| || |||||||| || ||
Sbjct 134587 AGCGTGCGGCCGTCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGG 134528
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||| || ||| ||| ||| | |||| |||| |||||||| ||| ||
Sbjct 134527 ATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCAC 134469
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091
|| | ||| | || || || ||||
Sbjct 134468 CTCCAAGGTGATGGTCTTACCCGTCA 134443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500681124800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |