Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=1096037 Score = 96.9 bits (106), Expect = 3e-15 Identities = 295/447 (66%), Gaps = 13/447 (3%) Strand=Plus/Plus Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||||| | ||||||| ||| ||| |||||| |||| ||||| ||| | || ||| | Sbjct 13860 ATCGACGGCAAGGTCGTCGAGCGTCCGCAACATTTGCTTATGCGTGTCTCCATCGGCATC 13919 Query 122949 CACG-GACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTT 123007 ||| ||| |||||||||||| |||| || || ||| | || || || || | Sbjct 13920 CACAAGAC-CGACATCGAAAAGGCGATTGATACGTACCACATGCTGAGCGAACGATGGAT 13978 Query 123008 CACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTG 123067 ||||||||| || || |||||| ||| || || | || ||| | |||||||| Sbjct 13979 GACGCACGCGTCGCCGACGTTGTTCAACGCTGGTACCCCGCGTCCGCAGCTTTCTTCGTG 14038 Query 123068 TTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTG 123127 || ||| | | || ||||| |||| || || || || || || || || Sbjct 14039 CTTCTTGATTTGCATGAAGGAAGATTCCATCGAGGGCATTTACGACACGCTGAAGGAGTG 14098 Query 123128 CGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCG 123187 ||||| ||||| |||| || ||| || || || || | | ||||| | || || Sbjct 14099 CGCGTGTATTTCAAAATCTGCCGGAGGTATCGGTTTGTCCATCCACGATATCCGA-GCTA 14157 Query 123188 CGGAAGC---CGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCC-ATGCTGC 123243 || ||| ||| || ||||| |||||| || | ||| | ||| ||||||| Sbjct 14158 CG--AGCTCTTACATTCGAGGCACCAACGGAA-CGTCGAACGGCATCATTCCGATGCTGC 14214 Query 123244 GAGTTTACAATAACGCCGTGCGGCACGTCGACCA---GGGCGGCAAACGCAAAGGCGCGA 123300 | || | ||| || | | || |||| ||||| || || || ||||| || ||| Sbjct 14215 GTGTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGGTGGTAAGCGCAAGGGAGCGT 14274 Query 123301 TGGCGATCTATCTAGAACCGTGGCACG 123327 | || ||||| || || |||||||||| Sbjct 14275 TCGCCATCTACCTCGAGCCGTGGCACG 14301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003086999200