Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=1096037
Score = 96.9 bits (106), Expect = 3e-15
Identities = 295/447 (66%), Gaps = 13/447 (3%)
Strand=Plus/Plus
Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948
||||| | ||||||| ||| ||| |||||| |||| ||||| ||| | || ||| |
Sbjct 13860 ATCGACGGCAAGGTCGTCGAGCGTCCGCAACATTTGCTTATGCGTGTCTCCATCGGCATC 13919
Query 122949 CACG-GACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTT 123007
||| ||| |||||||||||| |||| || || ||| | || || || || |
Sbjct 13920 CACAAGAC-CGACATCGAAAAGGCGATTGATACGTACCACATGCTGAGCGAACGATGGAT 13978
Query 123008 CACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTG 123067
||||||||| || || |||||| ||| || || | || ||| | ||||||||
Sbjct 13979 GACGCACGCGTCGCCGACGTTGTTCAACGCTGGTACCCCGCGTCCGCAGCTTTCTTCGTG 14038
Query 123068 TTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTG 123127
|| ||| | | || ||||| |||| || || || || || || || ||
Sbjct 14039 CTTCTTGATTTGCATGAAGGAAGATTCCATCGAGGGCATTTACGACACGCTGAAGGAGTG 14098
Query 123128 CGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCG 123187
||||| ||||| |||| || ||| || || || || | | ||||| | || ||
Sbjct 14099 CGCGTGTATTTCAAAATCTGCCGGAGGTATCGGTTTGTCCATCCACGATATCCGA-GCTA 14157
Query 123188 CGGAAGC---CGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCC-ATGCTGC 123243
|| ||| ||| || ||||| |||||| || | ||| | ||| |||||||
Sbjct 14158 CG--AGCTCTTACATTCGAGGCACCAACGGAA-CGTCGAACGGCATCATTCCGATGCTGC 14214
Query 123244 GAGTTTACAATAACGCCGTGCGGCACGTCGACCA---GGGCGGCAAACGCAAAGGCGCGA 123300
| || | ||| || | | || |||| ||||| || || || ||||| || |||
Sbjct 14215 GTGTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGGTGGTAAGCGCAAGGGAGCGT 14274
Query 123301 TGGCGATCTATCTAGAACCGTGGCACG 123327
| || ||||| || || ||||||||||
Sbjct 14275 TCGCCATCTACCTCGAGCCGTGGCACG 14301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003086999200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |