Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq12 223 3e-53
seq8 127 2e-24
seq7 113 5e-20
>seq12
Length=542657
Score = 223 bits (246), Expect = 3e-53
Identities = 627/935 (67%), Gaps = 31/935 (3%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
|||||||||| |||||||| | | || | ||||||||| |||| ||| ||||
Sbjct 197731 CATCACGCCAGCCTTTTGATACTGATCTACGCGGTGCTCAAAAAAGTTAGCTTTACCCTG 197790
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
| ||||||||| ||| |||| || |||||| | | ||| | |||| || | |
Sbjct 197791 AAGCGAAATGAGCTCCATCCAATCGAACGGGTTGACGGCGTTAAATAGCTT--TGATGCT 197848
Query 132711 C--AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTAT-TGCGACATGGTTTCGCA 132767
| || | | ||| || | ||| || |||||||||||||| ||| ||| | |||
Sbjct 197849 CCGAGCTGAATGAGTAGTCGGTCCGCGACGAACTCGATGTAAGTGCT-CATCATGTCGGC 197907
Query 132768 ATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCG 132825
||| | || | || ||| | ||| || || | ||| | || ||| ||
Sbjct 197908 ATTCATGCCAACGAGCGAGCAACT-CAGAGCGTCACACACGAACTCCTT-CTCAATTTTC 197965
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCG-CGCCGCGCTCGGCCGTTGCACCAA-ATGCT 132883
|||||||| ||||| | || ||| |||| |||| | | | | ||| ||||
Sbjct 197966 ACCGCGTCTCCTACGATATGATGAA-GCGTCGCCTCGCTGAGAGGATTCTGCAACATGCC 198024
Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943
| ||| ||||||||| |||||||| |||||||| ||||| | | ||||| ||||||
Sbjct 198025 -GTACAGCAAGCAAGCGAAGTCGCAGTGCAAGCCTTCGTCTCGGCTGATGAGCTCGTTGG 198083
Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003
||| || || ||| |||| | || || ||||| ||||| || |||||| ||| ||
Sbjct 198084 AGAAGGTTAAACCGCGCATCAATCCTCGCTTTTTCAGCCAGAAGATGGCGCAGAA--TGA 198141
Query 133004 CCGAA--AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGC 133061
|| | ||||||| || |||||| |||||| ||||||| | ||| |||| | ||
Sbjct 198142 CCCACTGAAGAAGATTCCTTCGACGCACGCGAATCCCACCAGCCTTTCGGCGAAGCTCGC 198201
Query 133062 TTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCA--CGGCATC 133119
|| ||| ||||||| | |||||||| || || |||| | | | || |||||
Sbjct 198202 GTC---GCTACCGATCCAATGAAGCGCCCAGTCTGC--TTTCATCGCCACAGTCGGCACT 198256
Query 133120 GTTTCGATGGCGTTCAACAAA-CGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGAT 133178
|| | |||||| ||||| |||| || ||||| || | | ||| ||||| |
Sbjct 198257 GTGTGAATGGCGCGAAACAATTCGGATTTCTTCTTCGGATCCTTG-ATGTACGTGTCCAA 198315
Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238
|| ||| ||||| || ||| | |||||| || |||| |||||| ||||| || |
Sbjct 198316 AAGCAGCGAGTACATCTCGCTGTGAATGTTCTCGATCGCGAGTTGAAATCCGTAGAACGA 198375
Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGAT 133298
|||||||| | |||||| || ||| ||| | |||||| ||| || ||
Sbjct 198376 TCGCGCCTCTGGAAGCTGCACGTCGCTCATGAATCGCGAGCACAGATTCTCGAGAACAAT 198435
Query 133299 GCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358
||||||||| | ||||||||| |||| |||||| | ||| || |||||| |||||
Sbjct 198436 GCCGTCGCTCGAGGCGAAAAACGCCAACACGTGAGACACGAAGTGCTTCTCGTTCTCGTT 198495
Query 133359 CAAGCG-CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417
| |||| || ||| || ||| | | || || |||||||| | ||||||||
Sbjct 198496 C-AGCGTCTGCCAATCCTTATAGTCGTACGTCAAATCAACCTCCTCCGCCGTCCAAAAGC 198554
Query 133418 ACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACA- 133476
|||||| || || || ||||| ||| | || || | || ||||| | |||
Sbjct 198555 TCGCCTCCGCCTTCTTATACATCTCCCAAACCCTCGGATGCTTGATCGGAAAGA-GACAG 198613
Query 133477 AACCGGCGGGGGTTTTCGCGCAACAGCGGCTCCGC 133511
|| ||| || || || | |||||||||||||||
Sbjct 198614 AATCGGTCCGGATTGTCCCTCAACAGCGGCTCCGC 198648
Score = 125 bits (138), Expect = 7e-24
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || |||||||||||||| ||||| || |||| || ||| || |
Sbjct 189118 ATGCAAATCTTCGTGAAGACGCTCACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCG 189177
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | | |||| | || | || |||| ||||| || || | ||||||| || |
Sbjct 189178 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGCA-TCCCGCCGGATC 189235
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| || || ||||| || |||| ||||| | ||||||||
Sbjct 189236 AGCAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACA 189295
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| ||||| | ||||| || |||||||| || ||| | || |||
Sbjct 189296 ACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGC 189345
Score = 125 bits (138), Expect = 7e-24
Identities = 170/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||||||||| || ||||| || |||| || ||| || |
Sbjct 189574 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189633
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | | |||| | || | || |||| ||||| || || | ||||||| || |
Sbjct 189634 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGCA-TCCCGCCGGATC 189691
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| || || ||||| || |||| ||||| | ||||||||
Sbjct 189692 AGCAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACA 189751
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCG 38473
||||||| ||||| | ||||| || |||||||| || ||| | || |||||
Sbjct 189752 ACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGCCG 189803
Score = 122 bits (134), Expect = 9e-23
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||||||||| || ||||| || |||| || ||| || |
Sbjct 189346 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189405
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | | |||| | || | || |||| ||||| || || | ||||||| || |
Sbjct 189406 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGCA-TCCCGCCGGATC 189463
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| || || ||||| || |||| ||||| | ||||||||
Sbjct 189464 AGCAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACA 189523
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| ||||| | ||||| || |||||||| || ||| | || |||
Sbjct 189524 ACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGC 189573
>seq8
Length=717457
Score = 127 bits (140), Expect = 2e-24
Identities = 176/246 (72%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953
|||||||||||| | ||||||||||| || | || ||||| |||||| ||| |||||
Sbjct 89985 GCAAGCAAAGTCACGGTGCAAGCCCTCATCGCGAGAGATGAGCTCGTTGGAGAAGGTCAA 90044
Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013
|| ||||| || ||||| || || ||||| | |||| | ||| || || |||||
Sbjct 90045 ACCCGGCATAAGACCGCGCTTCTTAAGCCAGTAGATGGAGCAGAACGAACCAGAGAAGAA 90104
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073
|| ||||| | | |||||| |||| ||| |||||| | |||| | || || | |
Sbjct 90105 GATACCCTCAATGCACGCGAACGCCAGCAGACGCTCGGCAAACGAG---TCGCTGGAGTC 90161
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133
||||| || |||||| || ||||| | || ||||| || || || ||||| |||
Sbjct 90162 AATCCACTTCAACGCCCAGTCAGCCTTCTTCTTAACGCATGGGATGGTCTCGATAGCGCG 90221
Query 133134 CAACAA 133139
|||||
Sbjct 90222 GAACAA 90227
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| || || ||||||||| | || || ||| || | |||| | | | |||| | || |
Sbjct 310446 ACTGGTAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACCATCGACAACG-TGAAGGC 310504
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| || || ||||| || ||||||| | || || || | |||| |||||| |
Sbjct 310505 GAAGATCCAAGATAAGGAGGGCAT-CCCGCCGGATCAGCAACGTTTGATTTTCGCGGGGA 310563
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || |||| ||||| | || ||||||||||||||||| | ||||| |
Sbjct 310564 AGCAGCTCGAGGACGGCCGCACGTTGGCGGATTACAACATCCAAAAGGAGTCTACGCTCC 310623
Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470
| |||||| |||| ||| |||| ||
Sbjct 310624 ACTTGGTGTTGCGCTTGCGAGGTGG 310648
>seq7
Length=770246
Score = 113 bits (124), Expect = 5e-20
Identities = 151/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
||||| || ||||||||| | || || ||| || | |||| | | | |||| | || |
Sbjct 134445 ACGGGTAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACCATCGACAACG-TGAAGGC 134503
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| || || ||||| || ||||||| | || || || || || | |||||| |
Sbjct 134504 GAAGATCCAAGATAAGGAGGGGAT-CCCGCCGGATCAGCAACGTCTGATCTTCGCGGGTA 134562
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| || || || |||| ||||| ||| ||||||||||||||||||||| | ||||| |
Sbjct 134563 AGCAACTCGAGGACGGCCGCACGCTCGCCGACTACAACATCCAAAAGGAGTCCACGCTCC 134622
Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470
| |||||| |||| ||| | || ||
Sbjct 134623 ACTTGGTGTTGCGCTTGCGCGGGGG 134647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172674956800
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