Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2 127 8e-24 seq8 96.9 1e-14 >seq2 Length=1074072 Score = 127 bits (140), Expect = 8e-24 Identities = 247/362 (68%), Gaps = 17/362 (5%) Strand=Plus/Plus Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTG 451304 ||||||||||||| | |||||||| ||||||||||| ||||| || || ||| | | Sbjct 261913 CTGAAGAAATTTCCGCGATGGTTCTCACTAAAATGAAGGAAACTGCTGAGGCATACCTCG 261972 Query 451305 GTTCTCCAG----TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAA 451360 | | || | | | || || | || |||||||| |||||||||||||| || Sbjct 261973 G----CAAGGACATCAAGAACGCCGTGGTGACGGTTCCCGCCTATTTCAATGATGCCCAG 262028 Query 451361 CGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAAT 451420 || ||||| || |||||||| ||| || |||||| |||| || ||||||| || Sbjct 262029 CGTCAAGCCACCAAAGATGCGGGAATCATCGCTGGTCTAAACGTGGCAAGAATTATCAAC 262088 Query 451421 GAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaa 451480 || ||||| || || || | || || || || ||| | ||||| | || ||| Sbjct 262089 GAGCCTACTGCCGCGGCAATCGCTTACGG-CTTGGACA---AAAAG-----GGCGAGAAA 262139 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||||| | || || ||| |||| ||||| || ||| || | ||| | ||||| Sbjct 262140 AATATCCTCGTCTTCGATCTTGGCGGAGGGACCTTTGACGTATCCATTCTTACCATTGAC 262199 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATT 451600 | || || || ||||| | | || || || |||||||| | || || |||||| || Sbjct 262200 AACGGCGTGTTCGAAGTGATCTCGACGAACGGAGATACTCACTTGGGCGGCGAAGATTTT 262259 Query 451601 GA 451602 || Sbjct 262260 GA 262261 >seq8 Length=717457 Score = 96.9 bits (106), Expect = 1e-14 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 391054 ATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATA 391113 || |||||| || || |||||||||| || || || | || || || || || || | Sbjct 310426 ATGTTTTCGCGAACGCAGTGACTGGTAAGACCATCACCTTGGAGGTGGAGTCCTCGGACA 310485 Query 391114 ACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAAC 391173 ||| || | || || || ||||||||||| || || || || ||||| |||| Sbjct 310486 CCATCGACAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATCCCGCCGGATCAGCAAC 310545 Query 391174 GTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTG 391233 |||| |||||| | ||||| || || || || || | || ||||||||||| || || Sbjct 310546 GTTTGATTTTCGCGGGGAAGCAGCTCGAGGACGGCCGCACGTTGGCGGATTACAACATCC 310605 Query 391234 ATAAGGATGCAACACTTCACTTAGTATT 391261 | ||||| | || || ||||| || || Sbjct 310606 AAAAGGAGTCTACGCTCCACTTGGTGTT 310633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717893722160