Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq17 666 0.0
seq14 235 7e-57
seq2 120 4e-22
seq4 91.5 2e-13
seq6 86.0 8e-12
>seq17
Length=411047
Score = 666 bits (738), Expect = 0.0
Identities = 1095/1578 (69%), Gaps = 18/1578 (1%)
Strand=Plus/Minus
Query 6523 GTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTT 6582
|||||| ||||| || |||||||| |||| ||| ||| || || ||||| ||| | ||
Sbjct 347405 GTAGTTCTCGAGGCCGTTCTTCGCATCGATCTTCTTCTTGTGCTCCTCATCCTCAGCCTT 347346
Query 6583 ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATC 6642
|||| || || ||||||||||| ||||| || || || | | ||||| ||
Sbjct 347345 GAACTTCTCGGCGTCTTGGACCATGCGCTCAATCTCCTCCTTGCTGAGGCGACCCTTGTC 347286
Query 6643 ATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702
|| || || |||||||| | || || || ||||| ||||| || ||||| |
Sbjct 347285 GTTGGTGATGGTAATCTTGTTCTTTTGGCCGGAAGCCTTGTCTTCGGCGGAAACATTGAG 347226
Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762
|||||| || ||||| | ||||| | || |||||||| || ||| | ||| || |
Sbjct 347225 AATACCGTTGGCATCGATGTCGAAGCACACGTTAATTTGCGGGACACCACGCGGAGCCGG 347166
Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822
|| || || | | || || | ||||| || |||||| || | || ||
Sbjct 347165 CGGGATGCCGGAGAGCTCGAACTTGCCAAGCAAGTGGTTATCGCGCGTGCGCGAGCGCTC 347106
Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882
||||| |||||| ||| ||| | || || || || || ||||| | |||
Sbjct 347105 GCCTTCGAAGACTTGAATCAACACACCCGGCTGGTTGTCGGAGTAAGTGGAGAACACTTG 347046
Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942
||| ||||| | || || || || || | ||| || | | |||||| | || || |
Sbjct 347045 TTCCTTCTTGGTCGGGATGGTGGTGTTGCGCGGGATGAGCACGGTCATCACGCCGCCAAC 346986
Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGTAACAGGTCTTGAACAGA 6999
|||||||| || | || || || | ||||| |||||| || |||||||||
Sbjct 346985 GGTTTCGAGACCCATCGAGAGCGGAGAAACGTCGAGCAAGAGCAA---GTCTTGAACCTT 346929
Query 7000 TTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059
||||| || || || | ||||||||||||||||| | ||| ||||| ||||| || ||
Sbjct 346928 CTCGTTGCCCTCGCCGGACAAGATGGCGGCTTGGACGGCCGCACCGTACGCGACGGCTTC 346869
Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119
||| ||||| || | || || || || ||||| || | || || || | |||||
Sbjct 346868 ATCCGGGTTGATGGACTTGCACAACTCCTTGCCGTTGAAGAAGTCGGACAAGAGCTGTTG 346809
Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179
|| ||||| || || || || ||||| || | || | ||| | || || || ||
Sbjct 346808 AACCTTCGGAATACGCGTGGAACCACCAACGAGGACAACTTCGTGGACGGAAGACTTGTC 346749
Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239
||||| ||||| || || || || || || ||||| || || ||||||||||||||
Sbjct 346748 CATCTTGGAGTCACGGAGGCACTTCTCAACCGGGTCCATGCACTTGCGGAACAAGTCCAT 346689
Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299
|| || || || || || |||||||| ||||| || ||||| || ||||| ||| | |
Sbjct 346688 GCAGAGCTCTTCGAAGCGAGCACGGGTGATGGAGGTGTAGAAGTCCACGCCCTCGAAGAG 346629
Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359
|| || || || | | ||||| || || ||||| || || ||||| ||||| || ||
Sbjct 346628 AGAGTCGATCTCGACAGAGGTTTGCGCAGTGGAAGACAAGGTGCGCTTCGCGCGTTCGCA 346569
Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419
||| || || | ||| || || || ||||||||| | || || ||||| || || ||
Sbjct 346568 CGCGGTGCGAAGACGGCGGAGAGCCTTCGGGTTACCAGTGATGTCCTTCTTGTGCTTGCG 346509
Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479
|| ||||||| |||||| | | | ||| ||||||||||| || ||||||||
Sbjct 346508 CTTGAACTCTTGGATGAAGTGCTGCAACAATCTGTTGTCGAAATCTTCGCCGCCCAAGTG 346449
Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539
|| || || || ||||| |||||||| ||||||||| | || ||| | || | || ||
Sbjct 346448 CGTGTCGCCAGCCGTCGCCTTGACTTCGAAGATACCTTCCTCGATGGTCAAGAGAGACAC 346389
Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT--- 7596
||| || ||||||||||| || || ||||| | |||||| | ||| || | |||||
Sbjct 346388 ATCGAAGGTACCACCACCGAGATCGAAAATTAAGACGTTCTTCTCGGCGCCGTTGTTCTC 346329
Query 7597 ------CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650
||| || | |||||||||||| ||||| || || || || || || || || |
Sbjct 346328 GTTGCGCTTGTCCAAACCGTACGCGATGGCCGCGGCGGTCGGCTCGTTGATGATGCGCAA 346269
Query 7651 ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710
||||||||||| || || || ||||| || |||||||| || || || ||||| ||
Sbjct 346268 GCAGTTCAGGCCGGCGATGACGGCGGCATCCTTGGTCGCTTGACGCTGGGAGTCGTTGAA 346209
Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770
||| |||||||| || ||||| |||| | ||| || ||| ||||| |||| || ||| |
Sbjct 346208 GTACGCCGGGACAGTGACGACGGCGTTCTTGATTTCCTTGCCGAGGTACGCCTCGGCGGT 346149
Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830
|| ||||| || | |||||| || ||||| || || || | |||| || | ||
Sbjct 346148 TTCCTTCATCTTAACCAAAACCATGGAAGAAATTTCCTCCGCGGAGAACTTCTTGGACTC 346089
Query 7831 ACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGA 7890
|||| ||||| || | ||||| ||||| || | || | ||||| | ||
Sbjct 346088 GCCGTGGAAATCCACGGCGATCATCGGTTTGTCGTGCTCGCCAGCCTCGACCTTGAAGGA 346029
Query 7891 CCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTT 7950
|||||| || || ||| |||| || || | || ||||| | ||||| | ||||||
Sbjct 346028 CCAATCCTTGATGTCGGCTTGAACTTGCGGTTCGCTGAACTTGCGACCGATCAAACGCTT 345969
Query 7951 TGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGAT 8010
||||| || || ||||| | |||||||| || |||||||||||||||| ||| || ||
Sbjct 345968 GGCATCGAAGACGGTGTTGGTCGGGTTCATCGCGGTTTGGTTCTTCGCCGAGTCACCAAT 345909
Query 8011 AAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTC 8070
| || || | || || |||||||||||||| || ||||| || || || |||
Sbjct 345908 CAAGCGCTC---GCTGTCGGTGAACGCGACGTACGACGGCGTCGTACGGTTACCCATGTC 345852
Query 8071 GTTCGCAATAATTTCTAC 8088
||||||||||||||| ||
Sbjct 345851 GTTCGCAATAATTTCAAC 345834
>seq14
Length=547765
Score = 235 bits (260), Expect = 7e-57
Identities = 379/545 (70%), Gaps = 0/545 (0%)
Strand=Plus/Plus
Query 22298 GACCATCAGAAATATATAACCTGGCGGCACAATCACATGTCGGTTTATCATTTAAAATGC 22357
|||| | ||| | || ||||| ||||| || || || || | || ||| ||||||
Sbjct 95731 GACCGACCGAAGTGTACAACCTCGCGGCGCAGTCTCACGTGCAGGTGTCTTTTCAAATGC 95790
Query 22358 CTATATATACATCGGAAGTTGATGGTATAGGTGTGTTGAAAATTCTAGAAGCGATCCGTT 22417
| || || || | || || || || | ||| | || | || || ||||| || |
Sbjct 95791 CGATGTACACCGCCGAGGTCGACGGCGTCGGTACCCTTAACCTGCTCGAGGCGATTCGCT 95850
Query 22418 TAGCAGGTCTAACAAAAACGTGTAAATTTTATCAGGCATCTACATCAGAGCTCTACGGTA 22477
| | || | || || ||| |||||||||||| || || || ||||||||||| |
Sbjct 95851 TGTCCGGACAGACGAAGACGGCGCGATTTTATCAGGCGTCCACGTCCGAGCTCTACGGCA 95910
Query 22478 AAGTAAATGAAACTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGG 22537
| || | || | ||| ||| ||| || || || || |||||||| || || || | |
Sbjct 95911 AGGTGCAGGAGATTCCGCAATCTGAGAAGACGCCCTTCTACCCGCGCTCGCCGTACGCCG 95970
Query 22538 TAGCTAAATTGATGGGATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTG 22597
| || ||| |||||| | ||||| ||||| || | || || |||| ||||| |
Sbjct 95971 TCGCGAAAATGATGGCTTTCTGGGCCGTGGTTAACTACCGCGAGTCGTACGATATGTACG 96030
Query 22598 CATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACAC 22657
| ||||| || || ||||||||||||| || ||| |||| || |||| ||| ||||| |
Sbjct 96031 CGTGCAACGGCATTTTGTTCAACCACGAGTCGCCGCGACGAGGGGAAACCTTTGTGACGC 96090
Query 22658 GAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTTG 22717
| || || || || | ||||| || |||| || || || ||| | || || ||||| |
Sbjct 96091 GTAAGATCACCCTTGCCGTCGCGAACATCAAGGCGGGCAAGCAAGAGTGCTTGTACCTCG 96150
Query 22718 GTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGATTACGTGAAATGTATGTGGA 22777
||||| | ||||| || || |||||||| || || ||||| |||||| | || |||||||
Sbjct 96151 GTAACTTGGATGCCAAGCGCGATTGGGGGCACGCTCGCGACTACGTGGAGTGCATGTGGA 96210
Query 22778 AAATATTACAACAAGATAAACCGGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCG 22837
| || | |||||||| || ||||||| | || | || || || | ||| | ||||
Sbjct 96211 AGATGCTTCAACAAGAGAAGGCGGAAGACTACGTCGTCGCCACCGGTGAAACCAACACCG 96270
Query 22838 TGAGA 22842
|| ||
Sbjct 96271 TGCGA 96275
>seq2
Length=1074072
Score = 120 bits (132), Expect = 4e-22
Identities = 281/421 (67%), Gaps = 11/421 (3%)
Strand=Plus/Minus
Query 196681 ACACCGACCGTTGCACCTACCTGACAATGTGTGGTCGAAAGAGGCCATCCAAGTCTACTT 196740
||||| | || || || || || || || || || ||||| ||||| || | || | |
Sbjct 503060 ACACCCATGGTGGCGCCGACTTGGCAGTGAGTCGTGGAAAGCGGCCAGCCCATTCGAGAT 503001
Query 196741 CCCATAATAACGACACATGCACTTCCAAGTTCAATACACGTTCCCCGACTTGGTGTAATT 196800
|||| ||| | |||||| ||| ||||||||||| || | || ||||| || || |
Sbjct 503000 CCCAAAATGATGACACACGCAGCGCCAAGTTCAATGCAAATACCTCGACTAGGGGTGAGC 502941
Query 196801 TTAGTAAGTTTTGTACCAAGTGCATGTAGGATTTTGTACCCGTACGTCGCTAAACCAATA 196860
|| | ||||| || || || || || ||||| ||| || ||| || | ||| |
Sbjct 502940 TTCGCGAGTTTGGTCCCGAGCGCGTGCAGGATGCGGTAACCATACAGAGCGAGACCGACG 502881
Query 196861 ACAATACCAAAAGCACCTAAAGAAAGTATCCAGTATGCATTAT-TACCA--AGATCGTTT 196917
|| || |||| ||||| | || || |||||||| || | | | ||| |||| ||
Sbjct 502880 ACGATGCCAAGGGCACCAAGGGAGAGAATCCAGTACGCGTCGTCTCCCATGGGATCCTTC 502821
Query 196918 TTCTTACTCGACACTTCACCCGATTCATATATTGCCCA----TATAGCCCCGAATGGTGC 196973
||||| | ||| | || | | || | ||| || | | || || |
Sbjct 502820 TTCTTTGTACTCACCTTGCCAGCCTTGTAAA----CCAGGACGATGGTGGCAAAGGGGCC 502765
Query 196974 GATTGAGTTGGCAACGTCATTTGCACCGTGTGCAAACGCATCACAACACGCCGTTATGAT 197033
||||||||| || ||||| || |||||||| || |||||||| || |||||||| | ||
Sbjct 502764 GATTGAGTTCGCGACGTCGTTAGCACCGTGCGCGAACGCATCGCAGCACGCCGTCAAAAT 502705
Query 197034 TTGTAGATACCGCAGGGATATTTCAGTTTTTGGATCGAATTTTTCAGCATTTTCGTGTAT 197093
||| || || | || | | || || ||| ||||| || ||||| || ||||| ||
Sbjct 502704 TTGAAGGTATCTCATGCTCAACTCGGTCTTTTCGTCGAACTTCTCAGCGTTGTCGTGGAT 502645
Query 197094 A 197094
|
Sbjct 502644 A 502644
Score = 89.7 bits (98), Expect = 7e-13
Identities = 201/291 (69%), Gaps = 12/291 (4%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| || || ||||| | ||| || || || | ||| | | ||| || |||| |||
Sbjct 404320 ATCGAAGTCGTCTCCACCGAGGTGAGTGTCTCCTGAGGTAGATAAGACCTCGAAGACACC 404379
Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574
|| ||| || || || || ||||| ||||| ||||| |||| || || || || |
Sbjct 404380 ATCTCCAAC-TTCAAGAATAGAGACATCGAACGTGCCACCTCCCAAATCGAAGATTAGGA 404438
Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || |||| || | ||| |||| | || || || | | |||||||| || |
Sbjct 404439 ---TTGTCTCGT--TCGAT-TTCCTATCAAACCCATAAGCCAGTGAGGCCGCCGTAGGCT 404492
Query 7635 CATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTG 7692
|||| || || | ||| | ||| | || ||||| | |||| ||||||| || |||||
Sbjct 404493 CATTGATGATTCTCAGA-ACTTCGATCCCCGCAATT-TGGCCGGCATCTTTGGTAGCTTG 404550
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743
|||||| || || ||||| || ||||| ||||| || || | |||||
Sbjct 404551 TCGTTGACTGTCATTGAAGTATGCAGGGACGGTTACAACGGCCTTAGTGAC 404601
Score = 82.4 bits (90), Expect = 1e-10
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 131789 GTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGGAAGAGCGCAGGTTCAAA 131848
||||||||||||||||||||||||| || ||| |||||||| ||||||| ||||||||
Sbjct 260354 GTGGCCGAGTGGTCTAAGGCGCCAGGTTCAGGTCCTGGTTCGAAAGAGCGTGGGTTCAAA 260413
Query 131849 TCC 131851
|||
Sbjct 260414 TCC 260416
>seq4
Length=944948
Score = 91.5 bits (100), Expect = 2e-13
Identities = 268/407 (66%), Gaps = 6/407 (1%)
Strand=Plus/Plus
Query 6590 TCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTA 6649
||||| || | ||||| ||||||||||| | ||| || | | || | ||| |
Sbjct 692830 TCCGCGTCGCGAACCATGTTTTCAATGTCGCTGTCCGACAAGC-CACCGGAAGATTG--A 692886
Query 6650 ATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCA 6709
|| || | ||||| ||||||| |||||||| | ||||| || || | |||||
Sbjct 692887 ATGGTGACCTTTTGCTCCTTACCCGTCGCCTTATCCTTGGCACTCACGTTGACGATACCG 692946
Query 6710 TTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATA 6769
|| || || | |||||| | || | |||||||| ||||| ||| || | || ||
Sbjct 692947 TTGGCGTCGATGTCGAACGTGACTTCGATTTGTGGCACACCCCGCGGCGCCGGCGGGATG 693006
Query 6770 CCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCA 6829
|| | ||||| ||| || |||| |||| ||| ||| || || ||||
Sbjct 693007 CCGACAAGGTCAAACTGACCGAGCGTCTTGTTGTCCGCGGCCATCTCGCGCTCGCCTTGC 693066
Query 6830 TAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTC 6889
| || || ||| ||| | ||| ||||| ||||| |||||| |||| |||
Sbjct 693067 AACACCTTGATTCCGACCTGGGTTTGGTTATCCGCGGCCGTGGAGAAGGTTTGGCTCTTC 693126
Query 6890 TTAGATGGAATCGTCGTATTTC-TCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948
|| | |||||||||||| || | | || || | | || | | || || | ||| ||
Sbjct 693127 TTCGTTGGAATCGTCGTGTTGCGGCTGATCAAGC-GCGTGAACACGCCGCCGAGAGTCTC 693185
Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGT-CTTGA 6994
|| |||||||| || || |||||||| | ||| || | || |||||
Sbjct 693186 GATGCCAAGAGAGAGTGGAGTCACGTCGAGGAGCAAAATGTCCTTGA 693232
>seq6
Length=793623
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 131789 GTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGGAAGAGCGCAGGTTCAAA 131848
||||||||| |||||||||||| ||||||||||| ||||| |||||||| ||||||||
Sbjct 615435 GTGGCCGAGCGGTCTAAGGCGCAGGATTAAGGCTCCTGTTCGAAAGAGCGCGGGTTCAAA 615376
Query 131849 TCCTGTC 131855
||| |||
Sbjct 615375 TCCCGTC 615369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132641216800
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