Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq17 666 0.0 seq14 235 7e-57 seq2 120 4e-22 seq4 91.5 2e-13 seq6 86.0 8e-12 >seq17 Length=411047 Score = 666 bits (738), Expect = 0.0 Identities = 1095/1578 (69%), Gaps = 18/1578 (1%) Strand=Plus/Minus Query 6523 GTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTT 6582 |||||| ||||| || |||||||| |||| ||| ||| || || ||||| ||| | || Sbjct 347405 GTAGTTCTCGAGGCCGTTCTTCGCATCGATCTTCTTCTTGTGCTCCTCATCCTCAGCCTT 347346 Query 6583 ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATC 6642 |||| || || ||||||||||| ||||| || || || | | ||||| || Sbjct 347345 GAACTTCTCGGCGTCTTGGACCATGCGCTCAATCTCCTCCTTGCTGAGGCGACCCTTGTC 347286 Query 6643 ATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702 || || || |||||||| | || || || ||||| ||||| || ||||| | Sbjct 347285 GTTGGTGATGGTAATCTTGTTCTTTTGGCCGGAAGCCTTGTCTTCGGCGGAAACATTGAG 347226 Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762 |||||| || ||||| | ||||| | || |||||||| || ||| | ||| || | Sbjct 347225 AATACCGTTGGCATCGATGTCGAAGCACACGTTAATTTGCGGGACACCACGCGGAGCCGG 347166 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 || || || | | || || | ||||| || |||||| || | || || Sbjct 347165 CGGGATGCCGGAGAGCTCGAACTTGCCAAGCAAGTGGTTATCGCGCGTGCGCGAGCGCTC 347106 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 ||||| |||||| ||| ||| | || || || || || ||||| | ||| Sbjct 347105 GCCTTCGAAGACTTGAATCAACACACCCGGCTGGTTGTCGGAGTAAGTGGAGAACACTTG 347046 Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942 ||| ||||| | || || || || || | ||| || | | |||||| | || || | Sbjct 347045 TTCCTTCTTGGTCGGGATGGTGGTGTTGCGCGGGATGAGCACGGTCATCACGCCGCCAAC 346986 Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGTAACAGGTCTTGAACAGA 6999 |||||||| || | || || || | ||||| |||||| || ||||||||| Sbjct 346985 GGTTTCGAGACCCATCGAGAGCGGAGAAACGTCGAGCAAGAGCAA---GTCTTGAACCTT 346929 Query 7000 TTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 ||||| || || || | ||||||||||||||||| | ||| ||||| ||||| || || Sbjct 346928 CTCGTTGCCCTCGCCGGACAAGATGGCGGCTTGGACGGCCGCACCGTACGCGACGGCTTC 346869 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 ||| ||||| || | || || || || ||||| || | || || || | ||||| Sbjct 346868 ATCCGGGTTGATGGACTTGCACAACTCCTTGCCGTTGAAGAAGTCGGACAAGAGCTGTTG 346809 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 || ||||| || || || || ||||| || | || | ||| | || || || || Sbjct 346808 AACCTTCGGAATACGCGTGGAACCACCAACGAGGACAACTTCGTGGACGGAAGACTTGTC 346749 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 ||||| ||||| || || || || || || ||||| || || |||||||||||||| Sbjct 346748 CATCTTGGAGTCACGGAGGCACTTCTCAACCGGGTCCATGCACTTGCGGAACAAGTCCAT 346689 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 || || || || || || |||||||| ||||| || ||||| || ||||| ||| | | Sbjct 346688 GCAGAGCTCTTCGAAGCGAGCACGGGTGATGGAGGTGTAGAAGTCCACGCCCTCGAAGAG 346629 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || || || || | | ||||| || || ||||| || || ||||| ||||| || || Sbjct 346628 AGAGTCGATCTCGACAGAGGTTTGCGCAGTGGAAGACAAGGTGCGCTTCGCGCGTTCGCA 346569 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 ||| || || | ||| || || || ||||||||| | || || ||||| || || || Sbjct 346568 CGCGGTGCGAAGACGGCGGAGAGCCTTCGGGTTACCAGTGATGTCCTTCTTGTGCTTGCG 346509 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||||| |||||| | | | ||| ||||||||||| || |||||||| Sbjct 346508 CTTGAACTCTTGGATGAAGTGCTGCAACAATCTGTTGTCGAAATCTTCGCCGCCCAAGTG 346449 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || || ||||| |||||||| ||||||||| | || ||| | || | || || Sbjct 346448 CGTGTCGCCAGCCGTCGCCTTGACTTCGAAGATACCTTCCTCGATGGTCAAGAGAGACAC 346389 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT--- 7596 ||| || ||||||||||| || || ||||| | |||||| | ||| || | ||||| Sbjct 346388 ATCGAAGGTACCACCACCGAGATCGAAAATTAAGACGTTCTTCTCGGCGCCGTTGTTCTC 346329 Query 7597 ------CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650 ||| || | |||||||||||| ||||| || || || || || || || || | Sbjct 346328 GTTGCGCTTGTCCAAACCGTACGCGATGGCCGCGGCGGTCGGCTCGTTGATGATGCGCAA 346269 Query 7651 ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710 ||||||||||| || || || ||||| || |||||||| || || || ||||| || Sbjct 346268 GCAGTTCAGGCCGGCGATGACGGCGGCATCCTTGGTCGCTTGACGCTGGGAGTCGTTGAA 346209 Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770 ||| |||||||| || ||||| |||| | ||| || ||| ||||| |||| || ||| | Sbjct 346208 GTACGCCGGGACAGTGACGACGGCGTTCTTGATTTCCTTGCCGAGGTACGCCTCGGCGGT 346149 Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 || ||||| || | |||||| || ||||| || || || | |||| || | || Sbjct 346148 TTCCTTCATCTTAACCAAAACCATGGAAGAAATTTCCTCCGCGGAGAACTTCTTGGACTC 346089 Query 7831 ACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGA 7890 |||| ||||| || | ||||| ||||| || | || | ||||| | || Sbjct 346088 GCCGTGGAAATCCACGGCGATCATCGGTTTGTCGTGCTCGCCAGCCTCGACCTTGAAGGA 346029 Query 7891 CCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTT 7950 |||||| || || ||| |||| || || | || ||||| | ||||| | |||||| Sbjct 346028 CCAATCCTTGATGTCGGCTTGAACTTGCGGTTCGCTGAACTTGCGACCGATCAAACGCTT 345969 Query 7951 TGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGAT 8010 ||||| || || ||||| | |||||||| || |||||||||||||||| ||| || || Sbjct 345968 GGCATCGAAGACGGTGTTGGTCGGGTTCATCGCGGTTTGGTTCTTCGCCGAGTCACCAAT 345909 Query 8011 AAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTC 8070 | || || | || || |||||||||||||| || ||||| || || || ||| Sbjct 345908 CAAGCGCTC---GCTGTCGGTGAACGCGACGTACGACGGCGTCGTACGGTTACCCATGTC 345852 Query 8071 GTTCGCAATAATTTCTAC 8088 ||||||||||||||| || Sbjct 345851 GTTCGCAATAATTTCAAC 345834 >seq14 Length=547765 Score = 235 bits (260), Expect = 7e-57 Identities = 379/545 (70%), Gaps = 0/545 (0%) Strand=Plus/Plus Query 22298 GACCATCAGAAATATATAACCTGGCGGCACAATCACATGTCGGTTTATCATTTAAAATGC 22357 |||| | ||| | || ||||| ||||| || || || || | || ||| |||||| Sbjct 95731 GACCGACCGAAGTGTACAACCTCGCGGCGCAGTCTCACGTGCAGGTGTCTTTTCAAATGC 95790 Query 22358 CTATATATACATCGGAAGTTGATGGTATAGGTGTGTTGAAAATTCTAGAAGCGATCCGTT 22417 | || || || | || || || || | ||| | || | || || ||||| || | Sbjct 95791 CGATGTACACCGCCGAGGTCGACGGCGTCGGTACCCTTAACCTGCTCGAGGCGATTCGCT 95850 Query 22418 TAGCAGGTCTAACAAAAACGTGTAAATTTTATCAGGCATCTACATCAGAGCTCTACGGTA 22477 | | || | || || ||| |||||||||||| || || || ||||||||||| | Sbjct 95851 TGTCCGGACAGACGAAGACGGCGCGATTTTATCAGGCGTCCACGTCCGAGCTCTACGGCA 95910 Query 22478 AAGTAAATGAAACTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGG 22537 | || | || | ||| ||| ||| || || || || |||||||| || || || | | Sbjct 95911 AGGTGCAGGAGATTCCGCAATCTGAGAAGACGCCCTTCTACCCGCGCTCGCCGTACGCCG 95970 Query 22538 TAGCTAAATTGATGGGATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTG 22597 | || ||| |||||| | ||||| ||||| || | || || |||| ||||| | Sbjct 95971 TCGCGAAAATGATGGCTTTCTGGGCCGTGGTTAACTACCGCGAGTCGTACGATATGTACG 96030 Query 22598 CATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACAC 22657 | ||||| || || ||||||||||||| || ||| |||| || |||| ||| ||||| | Sbjct 96031 CGTGCAACGGCATTTTGTTCAACCACGAGTCGCCGCGACGAGGGGAAACCTTTGTGACGC 96090 Query 22658 GAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTTG 22717 | || || || || | ||||| || |||| || || || ||| | || || ||||| | Sbjct 96091 GTAAGATCACCCTTGCCGTCGCGAACATCAAGGCGGGCAAGCAAGAGTGCTTGTACCTCG 96150 Query 22718 GTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGATTACGTGAAATGTATGTGGA 22777 ||||| | ||||| || || |||||||| || || ||||| |||||| | || ||||||| Sbjct 96151 GTAACTTGGATGCCAAGCGCGATTGGGGGCACGCTCGCGACTACGTGGAGTGCATGTGGA 96210 Query 22778 AAATATTACAACAAGATAAACCGGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCG 22837 | || | |||||||| || ||||||| | || | || || || | ||| | |||| Sbjct 96211 AGATGCTTCAACAAGAGAAGGCGGAAGACTACGTCGTCGCCACCGGTGAAACCAACACCG 96270 Query 22838 TGAGA 22842 || || Sbjct 96271 TGCGA 96275 >seq2 Length=1074072 Score = 120 bits (132), Expect = 4e-22 Identities = 281/421 (67%), Gaps = 11/421 (3%) Strand=Plus/Minus Query 196681 ACACCGACCGTTGCACCTACCTGACAATGTGTGGTCGAAAGAGGCCATCCAAGTCTACTT 196740 ||||| | || || || || || || || || || ||||| ||||| || | || | | Sbjct 503060 ACACCCATGGTGGCGCCGACTTGGCAGTGAGTCGTGGAAAGCGGCCAGCCCATTCGAGAT 503001 Query 196741 CCCATAATAACGACACATGCACTTCCAAGTTCAATACACGTTCCCCGACTTGGTGTAATT 196800 |||| ||| | |||||| ||| ||||||||||| || | || ||||| || || | Sbjct 503000 CCCAAAATGATGACACACGCAGCGCCAAGTTCAATGCAAATACCTCGACTAGGGGTGAGC 502941 Query 196801 TTAGTAAGTTTTGTACCAAGTGCATGTAGGATTTTGTACCCGTACGTCGCTAAACCAATA 196860 || | ||||| || || || || || ||||| ||| || ||| || | ||| | Sbjct 502940 TTCGCGAGTTTGGTCCCGAGCGCGTGCAGGATGCGGTAACCATACAGAGCGAGACCGACG 502881 Query 196861 ACAATACCAAAAGCACCTAAAGAAAGTATCCAGTATGCATTAT-TACCA--AGATCGTTT 196917 || || |||| ||||| | || || |||||||| || | | | ||| |||| || Sbjct 502880 ACGATGCCAAGGGCACCAAGGGAGAGAATCCAGTACGCGTCGTCTCCCATGGGATCCTTC 502821 Query 196918 TTCTTACTCGACACTTCACCCGATTCATATATTGCCCA----TATAGCCCCGAATGGTGC 196973 ||||| | ||| | || | | || | ||| || | | || || | Sbjct 502820 TTCTTTGTACTCACCTTGCCAGCCTTGTAAA----CCAGGACGATGGTGGCAAAGGGGCC 502765 Query 196974 GATTGAGTTGGCAACGTCATTTGCACCGTGTGCAAACGCATCACAACACGCCGTTATGAT 197033 ||||||||| || ||||| || |||||||| || |||||||| || |||||||| | || Sbjct 502764 GATTGAGTTCGCGACGTCGTTAGCACCGTGCGCGAACGCATCGCAGCACGCCGTCAAAAT 502705 Query 197034 TTGTAGATACCGCAGGGATATTTCAGTTTTTGGATCGAATTTTTCAGCATTTTCGTGTAT 197093 ||| || || | || | | || || ||| ||||| || ||||| || ||||| || Sbjct 502704 TTGAAGGTATCTCATGCTCAACTCGGTCTTTTCGTCGAACTTCTCAGCGTTGTCGTGGAT 502645 Query 197094 A 197094 | Sbjct 502644 A 502644 Score = 89.7 bits (98), Expect = 7e-13 Identities = 201/291 (69%), Gaps = 12/291 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || || ||||| | ||| || || || | ||| | | ||| || |||| ||| Sbjct 404320 ATCGAAGTCGTCTCCACCGAGGTGAGTGTCTCCTGAGGTAGATAAGACCTCGAAGACACC 404379 Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 || ||| || || || || ||||| ||||| ||||| |||| || || || || | Sbjct 404380 ATCTCCAAC-TTCAAGAATAGAGACATCGAACGTGCCACCTCCCAAATCGAAGATTAGGA 404438 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || |||| || | ||| |||| | || || || | | |||||||| || | Sbjct 404439 ---TTGTCTCGT--TCGAT-TTCCTATCAAACCCATAAGCCAGTGAGGCCGCCGTAGGCT 404492 Query 7635 CATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTG 7692 |||| || || | ||| | ||| | || ||||| | |||| ||||||| || ||||| Sbjct 404493 CATTGATGATTCTCAGA-ACTTCGATCCCCGCAATT-TGGCCGGCATCTTTGGTAGCTTG 404550 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 |||||| || || ||||| || ||||| ||||| || || | ||||| Sbjct 404551 TCGTTGACTGTCATTGAAGTATGCAGGGACGGTTACAACGGCCTTAGTGAC 404601 Score = 82.4 bits (90), Expect = 1e-10 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 131789 GTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGGAAGAGCGCAGGTTCAAA 131848 ||||||||||||||||||||||||| || ||| |||||||| ||||||| |||||||| Sbjct 260354 GTGGCCGAGTGGTCTAAGGCGCCAGGTTCAGGTCCTGGTTCGAAAGAGCGTGGGTTCAAA 260413 Query 131849 TCC 131851 ||| Sbjct 260414 TCC 260416 >seq4 Length=944948 Score = 91.5 bits (100), Expect = 2e-13 Identities = 268/407 (66%), Gaps = 6/407 (1%) Strand=Plus/Plus Query 6590 TCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTA 6649 ||||| || | ||||| ||||||||||| | ||| || | | || | ||| | Sbjct 692830 TCCGCGTCGCGAACCATGTTTTCAATGTCGCTGTCCGACAAGC-CACCGGAAGATTG--A 692886 Query 6650 ATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCA 6709 || || | ||||| ||||||| |||||||| | ||||| || || | ||||| Sbjct 692887 ATGGTGACCTTTTGCTCCTTACCCGTCGCCTTATCCTTGGCACTCACGTTGACGATACCG 692946 Query 6710 TTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATA 6769 || || || | |||||| | || | |||||||| ||||| ||| || | || || Sbjct 692947 TTGGCGTCGATGTCGAACGTGACTTCGATTTGTGGCACACCCCGCGGCGCCGGCGGGATG 693006 Query 6770 CCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCA 6829 || | ||||| ||| || |||| |||| ||| ||| || || |||| Sbjct 693007 CCGACAAGGTCAAACTGACCGAGCGTCTTGTTGTCCGCGGCCATCTCGCGCTCGCCTTGC 693066 Query 6830 TAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTC 6889 | || || ||| ||| | ||| ||||| ||||| |||||| |||| ||| Sbjct 693067 AACACCTTGATTCCGACCTGGGTTTGGTTATCCGCGGCCGTGGAGAAGGTTTGGCTCTTC 693126 Query 6890 TTAGATGGAATCGTCGTATTTC-TCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948 || | |||||||||||| || | | || || | | || | | || || | ||| || Sbjct 693127 TTCGTTGGAATCGTCGTGTTGCGGCTGATCAAGC-GCGTGAACACGCCGCCGAGAGTCTC 693185 Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGT-CTTGA 6994 || |||||||| || || |||||||| | ||| || | || ||||| Sbjct 693186 GATGCCAAGAGAGAGTGGAGTCACGTCGAGGAGCAAAATGTCCTTGA 693232 >seq6 Length=793623 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 131789 GTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGGAAGAGCGCAGGTTCAAA 131848 ||||||||| |||||||||||| ||||||||||| ||||| |||||||| |||||||| Sbjct 615435 GTGGCCGAGCGGTCTAAGGCGCAGGATTAAGGCTCCTGTTCGAAAGAGCGCGGGTTCAAA 615376 Query 131849 TCCTGTC 131855 ||| ||| Sbjct 615375 TCCCGTC 615369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132641216800