Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 seq9 127 2e-24 seq11 113 5e-20 seq14 105 8e-18 seq8 104 3e-17 seq13 93.3 5e-14 >seq1 Length=1096037 Score = 141 bits (156), Expect = 1e-28 Identities = 405/616 (66%), Gaps = 20/616 (3%) Strand=Plus/Minus Query 11347 TCATTTAGGAGATTAGCGAGGTCGGCGCCAGAAAACCCTGTAGTTTGTTTAGCAATATTT 11406 ||||| || | ||| | | ||| || ||||| || |||| ||| | || || || || Sbjct 796323 TCATTGAGCAAATTCGACAAGTCAGCACCAGAGAAGCCTGGGGTTCGCTTTGCGATCATT 796264 Query 11407 GCGAGATCAACGGTGTCATCCA---GCGTTTTGTCCCTCGCATGAACACCCAAAATCTTC 11463 | || |||||| || || | || | || | | ||||| || ||||| |||| | Sbjct 796263 TCAAGGTCAACGTCTTCTTCGAAACGCTTATTTT---TGGCATGGACTCCCAAGATCTCC 796207 Query 11464 CTGCGTCCTTGAACACTGGGGAGAGTCACCTGAATCTTACGATCGAAACGACCTGGGCGG 11523 |||| |||| | | || | | || || | | |||||||| ||||| ||||| Sbjct 796206 TTGCGCCCTTCGAGATCCGGAACATCGACTTGCACTTGGCGATCGAAGCGACCCGGGCGA 796147 Query 11524 AGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAGTC 11583 || || || || ||||| || | ||||| || || || ||||| | ||||||||| Sbjct 796146 AGGAGCGCCGGGTCGAGAATGTCTGCGCGGTTCGTCGCTGCGATGACGATAATGCCAGTG 796087 Query 11584 TCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCG 11643 | |||||||| ||||| || || || |||||||| | ||||| |||||||||||| Sbjct 796086 TTGCCTTCGAAACCATCCATCTCGGTAAGGAGCTGGTTCAAGGTCTGCTCACGCTCATCG 796027 Query 11644 TT-GGAGGGC--ATACC---ACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCG 11697 || | | ||||| ||| ||| || ||||| || || || || ||| Sbjct 796026 TTACCACCTCCAATACCGGTACCACGCGATCG------GCCGACGGCATCGATTTCGTCG 795973 Query 11698 ATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTC 11757 | ||| ||||| ||||| || | ||||| | ||| || || || || || Sbjct 795972 ACGAAAACGATGCACGGGGCATTTTCCTTTGCCTTCTTGAAGAGGTCGCGGACGCGGGAT 795913 Query 11758 GCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAAC 11816 || || ||||| || |||||||| ||||| || | | | | | || | || ||||| Sbjct 795912 GCACCGACACCGACAAACATCTCGACGAA-TTCGGAACCGGAGATGGAGAAAAACGGAAC 795854 Query 11817 ATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGC 11876 | | ||| || ||||| || || || || |||||||| ||||| || | ||| | Sbjct 795853 ACCCGCCTCTCCGGCGATCGCCTTGGCAAGAAGGGTCTTACCGGTACCCGGCGGACCGAC 795794 Query 11877 GAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAG 11936 | |||| ||| || ||||||||||| | | | | |||||||| ||| || Sbjct 795793 CAAAAGGCAGCCCTTCGGAATCTTGGCACCGACTGCGGTGAATCGCTCAGGGCGCTTCAG 795734 Query 11937 GAAGTCCACAATCTCC 11952 ||| || || || ||| Sbjct 795733 GAACTCAACGATTTCC 795718 Score = 132 bits (146), Expect = 6e-26 Identities = 491/761 (65%), Gaps = 9/761 (1%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| || || || | |||||||| | || || || | ||||| || | | Sbjct 14740 GGCAGAGCGATGGAAGCCAAGTTGCACACGGCGGTTTCATCCGGGCTCGTGTACTCAACA 14681 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || ||||||||||| ||| || || | ||| | || || || ||| | Sbjct 14680 ATCTCTGTGCACAAGTTGGAGGACTTGATCGTGCCGAGGTTTTGTTGGTTAGACTTGCGG 14621 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||||| ||||||||| |||||||||||||| |||| || || || |||| ||| ||| Sbjct 14620 TTGCACGCATCCTTAAAGAGCATGTATGGGTTACCGGTCTCAACTTGGGACTCGAGGATG 14561 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 || ||| | | || || || ||| | ||| ||| | |||||||| Sbjct 14560 GCAAACCAAAGTTGTTGAGCCTTGATGGTCTTCTTACCCTTACCCTCCGCTTCGTACTTT 14501 Query 110521 GTGTACA-AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTGTCGG 110578 |||| ||| || ||||||| || | ||||| | | || || || || | Sbjct 14500 TCATACAGAGT-TTCGAATTCCTCACCCCAGCAGTCAGACA-ATCCAGGGCACTCGTTCG 14443 Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638 | || | | | ||| | || | |||| || | |||||| |||| ||| ||| Sbjct 14442 GGCACATCAACGTCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTCGTTCGTCC 14383 Query 110639 ACATCGCCG-AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 ||| |||| |||| || || || || || || || | ||| ||||| || | Sbjct 14382 ACA-GGCCGTAGAACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTTCTTACGCAAG 14324 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 || | |||| | ||| || | |||||| || ||||| |||| |||| | |||||| Sbjct 14323 TCAAGCCAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGCTCCCTTG 14264 Query 110758 CG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || || ||| | |||| || ||||| || ||| | ||||| || | ||||| ||| Sbjct 14263 CGCTTACCACCACCTTGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATCGGA 14204 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 || || || | || || || || || | ||| || | | || || || ||| Sbjct 14203 ATGATGCCGTTCGACGTTCCGTTGGTGCCTCGAATGTAAGAGCTCGTAGCTCGGATATCG 14144 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTA 110934 ||||| || ||| ||||| || || | || ||| || ||||| | || || Sbjct 14143 TGGATGGACAAACCGATACCTCCGGCAGATTTTGAAATACACGCGCACTCCTTCAGCGTG 14084 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 | ||||| || || || |||||| |||| || ||| | ||||| ||||| | ||| Sbjct 14083 TCGTAAATGCCCTCGATGGAATCTTCCTTCATGCAAATCAAGAAGCACGAAGAAAGCTGC 14024 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| || || || || ||||| | || || | ||| || Sbjct 14023 GGACGCGGGGTACCAGCGTTGAACAACGTCGGCGACGCGTG 13983 >seq9 Length=713054 Score = 127 bits (140), Expect = 2e-24 Identities = 252/372 (68%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||| |||||||| || ||||| || |||||| ||| |||| || ||||| || || Sbjct 441802 ACGGTCGAAACGGCCCGGGCGAAGAAGAGCACTATCGAGAACGTCCGGTCGGTTCGTGGC 441743 Query 11562 GGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621 || | ||| | | |||||| | ||||| |||||||| || ||||| |||||||| Sbjct 441742 AGCCAGGACGATGACGCCAGTGTTGCCTTCGAACCCGTCCATCTCGGTGAGGAGCTGGTT 441683 Query 11622 GATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC--TGCCGAA----CGCTTCTT 11675 || || || ||||||||||||||| | ||||| ||||| | |||| Sbjct 441682 AATAGTTTGCTCACGCTCATCGTTGCCG------CCACCCATGCCGGAACCGCGCTGACG 441629 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||| || || || || ||||||||||| | ||| ||||| || || || | ||| Sbjct 441628 ACCAACGGCATCGATTTCATCGATGAAGATGATGCACGGAGCCTTTGCCTTGGCTTTTTC 441569 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || || ||| ||| || ||||| || || | || ||||| | | || Sbjct 441568 GAACAAATCGCGAACGCGCGACGCACCGACACCGACAAAGAGTTCGACGAACTCGGAAGC 441509 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 | ||| | ||| || ||| | ||||| |||| || |||| ||| ||||| Sbjct 441508 GGCGCACGAGAAGAACGGCACACCTGCTTCACCGGCGACCGCCTTGGCGATGAGCGTCTT 441449 Query 11856 ACCCGTACCAGG 11867 ||||||||| || Sbjct 441448 ACCCGTACCCGG 441437 >seq11 Length=595839 Score = 113 bits (124), Expect = 5e-20 Identities = 243/361 (67%), Gaps = 2/361 (1%) Strand=Plus/Plus Query 11499 CTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGT 11558 ||| |||||||||||||||||||| | || || || || | ||| | | ||| || Sbjct 374239 CTTGCGATCGAAACGACCTGGGCGCAACAGCGCCGGGTCGAGCAAATCAGCTCTGTTCGT 374298 Query 11559 AGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 ||| |||||| || | |||||| ||| | |||||| ||||| || || |||||||| Sbjct 374299 GGCGCCAATGAACACGACGCCAGTGTCAGGGGTGAAACCATCCATCTCAGTAAGAAGCTG 374358 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTACC 11678 ||| | ||||||||| |||| || | | || | || | || | |||||| | || Sbjct 374359 GTTCAACGTCTGTTCGTGCTCCTCCGTACCGCGCGTGCCGGCCGCGGCTCGCTTCATGCC 374418 Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAA 11738 || || || || ||||| | || | | || || |||| || || | | ||| Sbjct 374419 GAGCGCATCGATTTCATCCACAAAAATCAGGCAAGGAGCGTTGATTCGAGCACGCTTGAA 374478 Query 11739 AAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA 11798 | || | || ||| || |||||||| |||| || || || || | | ||| Sbjct 374479 CAAATCTCTCACTCGCGCAGCGCCAACACCGACGATGATTTCGACAAACTCAGAACCAG- 374537 Query 11799 ACACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 ||| || | ||| || || |||| ||| || ||||| ||| |||| ||| ||||||| Sbjct 374538 ACATGGAGTAGAACGGCACTTTAGCCTCGCCCGCGATCGCTTTTGCGATGAGCGTCTTAC 374597 Query 11858 C 11858 | Sbjct 374598 C 374598 >seq14 Length=547765 Score = 105 bits (116), Expect = 8e-18 Identities = 274/411 (67%), Gaps = 9/411 (2%) Strand=Plus/Plus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||||||||| || || || || || || || | || |||||||| |||||||| | Sbjct 256307 ACGATCGAAGCGTCCCGGACGCAGGAGCGCCTTGTCCAGAATATCCGGTCGGTTTGTGCC 256366 Query 11562 GGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621 || | || | | ||| || || |||| || ||||| || ||||||||| || Sbjct 256367 CGCCAATACGATGACGCCTTCCTTGGTGCCGAACCCATCCATCTCAACGAGAAGCTGATT 256426 Query 11622 GATCGTCTGTTCACGCTCATCGTTGGAG--GGCATA-CCACCTGCCGA--ACGCTTCTTA 11676 | ||| | |||||||| ||||| |||| | ||||| ||| ||||| | Sbjct 256427 CAACGTGTTCTCACGCTCGTCGTTACCCCCGGCAAAACCACC--CCGTCCACGCTGGCGA 256484 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| || || || || |||||||| | ||| |||||| | || |||||||| | Sbjct 256485 CCGATTGCATCGATTTCGTCGATGAAGATGATGGACGGTTTCTGTGCGCGTGCCTGCGCA 256544 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || | || || || || | ||||| || ||||||||||| | ||| | | | | Sbjct 256545 AACAAGTCTCGCACGCGAGAGGGACCAACGCCGACGAACATCTCCATGAAATCAGAGCCG 256604 Query 11797 GAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 || | ||| | ||| || || | || ||||| |||| ||||| || ||||| Sbjct 256605 GAG-ATTGACAAGAAAGGCACGCCCGCTTCCCCAGCCGTGGCCTTCGCGAGAAGTGTCTT 256663 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 |||||| || || | || |||| ||||||||| | || ||||| || || Sbjct 256664 ACCCGTCCCGGGCGGCCCGACGAGGAGGGCGCCATGCGGAATCTTTGCCCC 256714 >seq8 Length=717457 Score = 104 bits (114), Expect = 3e-17 Identities = 373/564 (66%), Gaps = 26/564 (5%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || || || || | ||| |||||||| || ||||| || | ||| |||||| |||||| Sbjct 89701 TATTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCTTGGAGCGAGATGAGTTCCATC 89760 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGA--TTGGTGGTTGACCAACTT-GTTTCAGAAGA 119324 ||||||| || || | ||| | |||| | ||||| | | | ||| Sbjct 89761 CAGTCAAACGGGTTCGCCGTGTTGTACTCCTTGGGCAT--ACCAAGGGAGGTGAACAAGT 89818 Query 119325 CGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTA 119384 | |||| ||| || || || || ||| |||| | | | |||||||| | ||| Sbjct 89819 GG-TCGGCGACGTATTCAATGTAGTCGCTCATCATACCGGCGTTCATACCAACGAGCGCG 89877 Query 119385 CACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAG 119444 ||||| |||| ||| | ||| | |||||||||||| || ||||| | || || Sbjct 89878 CACGGAAGAGAGTCGCACACGAACTCCTTCTCGATCTCAACCGCTTCGGTGACAATCTTA 89937 Query 119445 TGAATAGTTTCTGTCGAT-GGTTTGTTTCTCAAGAGTT--TAAACAACTCTACGGCAAAT 119501 | | |||| ||| || ||||| | | | || || | | | | ||||| Sbjct 89938 CGCACGACTTCT-TCGTCCGGCTTGTTGTTGAGCATTTGGTATAAGAGGCAA--GCAAAG 89994 Query 119502 TCTTGATG-AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGC 119558 || | || ||||||| |||| |||||||||||||| || |||| |||| || ||| Sbjct 89995 TCACGGTGCAAGCCCT-CATCGCGAGAGATGAGCTCGTTGGAGAAGGTCAAA--CCCGGC 90051 Query 119559 ATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCC 119618 || || || | ||||| ||||| |||||| || || ||||| |||||||| ||| Sbjct 90052 ATAAGACCGCGCTTCTTAAGCCAGTAGATGGAGCAGAACGAACCAGAGAAGAAGATACCC 90111 Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACT--TGTCGAACCAC 119675 || | || ||||| || | |||||||| ||||| | |||| || ||| | |||| Sbjct 90112 TCAATGCACGCGAACGCCAGCAGACGCTCGGCAAACGAGTCG---CTGGAGTCAATCCAC 90168 Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAG 119734 || | ||||||| ||||| || | ||| |||| || | ||| || ||| ||| Sbjct 90169 TTCAACGCCCAGTCAGCCTTCTTCTTAACGCATGGGATGGTCTCGATAGCGCGGAACAAG 90228 Query 119735 TTGCTTCTTTTCAGCACCATCCTT 119758 | || |||| || || |||||| Sbjct 90229 TGGC-TCTTCTCGGCCGGATCCTT 90251 >seq13 Length=549623 Score = 93.3 bits (102), Expect = 5e-14 Identities = 168/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 167557 CGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCG 167616 || |||||||||||||| | ||| |||| | |||||||| ||||| || |||| Sbjct 19868 CGCGTACCAAATTGACCGCTCGGCACGAGCAAGTTGATGTTGTTCGAACCGACGAAATCT 19809 Query 167617 TTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTT 167676 | ||||| |||||||| || ||||| ||| |||||||||| || || || | Sbjct 19808 TGCGCCAAGTTGACGATGGTCATCGCGAGTGAAGCTTCGCCGTGATGATACGCGGAGTGC 19749 Query 167677 TCAGCCACATATGCTGC-CAACTGTGCAACCTTCATCTCATCTTTGAGATTCTTTTGGAA 167735 || | ||||| || || |||||| || || || || || ||||| || | ||| Sbjct 19748 TCCGAGACATA-GCCGCTCAACTGCGCGACTTTGATATCCGACTTGAGCTTGCGCTTGAA 19690 Query 167736 ACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATCTGCCACGTGAGCAATTGA 167795 ||||| | | |||||||||||| || || |||| || || ||| | | ||| || Sbjct 19689 GCATGAGAAGAGAACCTTGCGTTGTGAGGGCTTGAAGCCGTCCACCATGCTCGGAATCGA 19630 Query 167796 GCG 167798 ||| Sbjct 19629 GCG 19627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975852756000