Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 1e-31
seq7 123 6e-23
seq8 111 3e-19
>seq12
Length=542657
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| ||||| | ||| | || || ||||||||
Sbjct 189321 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCGAGCTG 189262
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | ||||| || || || || |||||||| |||||||| || ||
Sbjct 189261 CTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTGGATCTT 189202
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || ||||||||||| |||||||| || |||| ||||| || ||
Sbjct 189201 CGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTTGCCCGT 189142
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 189141 GAGCGTCTTCACGAAGATTTGCAT 189118
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| ||||| | ||| | || || ||||||||
Sbjct 189549 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCGAGCTG 189490
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | ||||| || || || || |||||||| |||||||| || ||
Sbjct 189489 CTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTGGATCTT 189430
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || ||||||||||| |||||||| || |||| ||||| || ||
Sbjct 189429 CGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTTACCCGT 189370
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 189369 GAGCGTCTTCACGAAGATTTGCAT 189346
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| ||||| | ||| | || || ||||||||
Sbjct 189777 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCGAGCTG 189718
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | ||||| || || || || |||||||| |||||||| || ||
Sbjct 189717 CTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTGGATCTT 189658
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || ||||||||||| |||||||| || |||| ||||| || ||
Sbjct 189657 CGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTTACCCGT 189598
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 189597 GAGCGTCTTCACGAAGATTTGCAT 189574
>seq7
Length=770246
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || | ||| || |||||||| ||||| || ||||| ||||| || || | || ||
Sbjct 134633 CAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTC 134574
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||||| |||||||| |||||||| || ||||| || || || || || || || || ||
Sbjct 134573 CTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGGATCCCCTCCTTATC 134514
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| || || ||| ||||| || ||||||||||| ||||| || | ||| | ||
Sbjct 134513 TTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGT 134454
Query 195108 CTTTCCTGTCA 195118
||| || ||||
Sbjct 134453 CTTACCCGTCA 134443
>seq8
Length=717457
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || | ||| || || ||||| ||||| || |||||||| || | || | || ||
Sbjct 310634 CAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCCAACGTGCGGCCGTC 310575
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||||||||||| || ||||| || | ||||| || || || || ||||| || || ||
Sbjct 310574 CTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGGATGCCCTCCTTATC 310515
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||| || || ||| ||||| || ||||||||||| ||||| || | ||| | ||
Sbjct 310514 TTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGT 310455
Query 195108 CTTTCCTGTCA 195118
||| || ||||
Sbjct 310454 CTTACCAGTCA 310444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481315695340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |