Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq12 82.4 6e-11
>seq12
Length=542657
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || |||||| ||| || || || ||||| || | | | | ||| |||| ||
Sbjct 189327 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189268
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
| |||||||||||| || |||| || || ||||||| || | ||| ||||||||
Sbjct 189267 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189208
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
||||| || || | | | || || | |||||| || | |||||| || ||
Sbjct 189207 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189148
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| | || || || || || |||||
Sbjct 189147 GCCCGTGAGCGTCTTCACGAAGATTTGCAT 189118
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || |||||| ||| || || || ||||| || | | | | ||| |||| ||
Sbjct 189555 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189496
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
| |||||||||||| || |||| || || ||||||| || | ||| ||||||||
Sbjct 189495 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189436
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
||||| || || | | | || || | |||||| || | |||||| || ||
Sbjct 189435 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189376
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| | || || || || || |||||
Sbjct 189375 ACCCGTGAGCGTCTTCACGAAGATTTGCAT 189346
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || |||||| ||| || || || ||||| || | | | | ||| |||| ||
Sbjct 189783 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189724
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
| |||||||||||| || |||| || || ||||||| || | ||| ||||||||
Sbjct 189723 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189664
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
||||| || || | | | || || | |||||| || | |||||| || ||
Sbjct 189663 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189604
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| | || || || || || |||||
Sbjct 189603 ACCCGTGAGCGTCTTCACGAAGATTTGCAT 189574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937507146460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |