Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 2e-20
>seq8
Length=717457
Score = 114 bits (126), Expect = 2e-20
Identities = 360/558 (65%), Gaps = 18/558 (3%)
Strand=Plus/Minus
Query 25771 GCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
||||||| ||| | || ||| | || |||||| ||| || || | |||| ||||||
Sbjct 90242 GCCGAGA-AGAGCCACTTGTTCCGCGCTATCGAGACCATCCCATGCGTTAAGAAGAAGGC 90184
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
||||| |||||||||| || | |||| |||||| |||||| ||| | ||
Sbjct 90183 TGACTGGGCGTTGAAGTGGATTGACTCC---AGCGACTCGTTTGCCGAGCGTCTGCTGGC 90127
Query 25890 CTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTC 25947
|| || ||| || |||| ||||| ||| |||||||| ||| |||||| ||||||
Sbjct 90126 GTTCGCGTGCATTG-AGGGTATCTTCTTCTCTGGTTCGTTCTGCT-CCATCTACTGGCTT 90069
Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
||| || || ||||| || || ||| ||||||||||||||| | || |||
Sbjct 90068 AAGAAGCGCGGTCTTATGCCGGGTTTGACCTTCTCCAACGAGCTCATCTCTCGCGATGAG 90009
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCT---CCACAAACCT 26064
|| | ||| | || ||||| ||||| | || ||| |||| | |||| ||
Sbjct 90008 GGCTTGCACCGTGACTTTGCTTGCCTCTTATA------CCAAATGCTCAACAACAAGCCG 89955
Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124
|||| ||| | || ||| || || || |||||||||||||||||
Sbjct 89954 GACGAAGAAGTCGTGCGTAAGATTGTCACCGAAGCGGTTGAGATCGAGAAGGAGTTCGTG 89895
Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184
| || |||||| | | | |||||| | ||||||
Sbjct 89894 TGCGACTCTCTTCCGTGCGCGCTCGTTGGTATGAACGCCGGTATGATGAGCGACTACATT 89835
Query 26185 GAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244
|| || || |||||||| || | | || || | ||| |||| ||| |
Sbjct 89834 GAATACGTCGCCGACCACTTGTTCACCTCCCTTGGTATGCCCAAGGAGTACAACACGGCG 89775
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
|||||||| |||| |||||| ||| ||| | |||| |||||||||||||| || |||
Sbjct 89774 AACCCGTTTGACTGGATGGAACTCATCTCGCTCCAAGGCAAGACCAACTTCTTCGAGAAG 89715
Query 26305 AGGGTCGGCGACTATCAA 26322
| |||||||| || |||
Sbjct 89714 CGCGTCGGCGAATACCAA 89697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844567788800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |