Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-20 >seq8 Length=717457 Score = 114 bits (126), Expect = 2e-20 Identities = 360/558 (65%), Gaps = 18/558 (3%) Strand=Plus/Minus Query 25771 GCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||||||| ||| | || ||| | || |||||| ||| || || | |||| |||||| Sbjct 90242 GCCGAGA-AGAGCCACTTGTTCCGCGCTATCGAGACCATCCCATGCGTTAAGAAGAAGGC 90184 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| |||||||||| || | |||| |||||| |||||| ||| | || Sbjct 90183 TGACTGGGCGTTGAAGTGGATTGACTCC---AGCGACTCGTTTGCCGAGCGTCTGCTGGC 90127 Query 25890 CTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTC 25947 || || ||| || |||| ||||| ||| |||||||| ||| |||||| |||||| Sbjct 90126 GTTCGCGTGCATTG-AGGGTATCTTCTTCTCTGGTTCGTTCTGCT-CCATCTACTGGCTT 90069 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||| || || ||| ||||||||||||||| | || ||| Sbjct 90068 AAGAAGCGCGGTCTTATGCCGGGTTTGACCTTCTCCAACGAGCTCATCTCTCGCGATGAG 90009 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCT---CCACAAACCT 26064 || | ||| | || ||||| ||||| | || ||| |||| | |||| || Sbjct 90008 GGCTTGCACCGTGACTTTGCTTGCCTCTTATA------CCAAATGCTCAACAACAAGCCG 89955 Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 |||| ||| | || ||| || || || ||||||||||||||||| Sbjct 89954 GACGAAGAAGTCGTGCGTAAGATTGTCACCGAAGCGGTTGAGATCGAGAAGGAGTTCGTG 89895 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184 | || |||||| | | | |||||| | |||||| Sbjct 89894 TGCGACTCTCTTCCGTGCGCGCTCGTTGGTATGAACGCCGGTATGATGAGCGACTACATT 89835 Query 26185 GAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 || || || |||||||| || | | || || | ||| |||| ||| | Sbjct 89834 GAATACGTCGCCGACCACTTGTTCACCTCCCTTGGTATGCCCAAGGAGTACAACACGGCG 89775 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 |||||||| |||| |||||| ||| ||| | |||| |||||||||||||| || ||| Sbjct 89774 AACCCGTTTGACTGGATGGAACTCATCTCGCTCCAAGGCAAGACCAACTTCTTCGAGAAG 89715 Query 26305 AGGGTCGGCGACTATCAA 26322 | |||||||| || ||| Sbjct 89714 CGCGTCGGCGAATACCAA 89697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844567788800