Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-18 >seq2 Length=1074072 Score = 109 bits (120), Expect = 4e-18 Identities = 210/310 (68%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 |||| ||||| |||| || || || || || | || |||||||| | || || | | Sbjct 319909 ATATAGTACTACTTGATGTCACACCGCTGTCTCTTGGGCTTGAAACTCTGGGGGGCGTGA 319850 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 |||| || || ||| | ||||||| || | ||| ||||| |||| ||||||| Sbjct 319849 TGACAAAGCTCATTCCCCGAAATACGACTTTGCCAACATCGAAATCTGAAGTGTTTTCCA 319790 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 || | || |||||| | || || | || | |||| || | | || Sbjct 319789 CTGCCGCCGACGGTCAAACTAGCGTGGAAATTAACGTCCTACAAGGGGAGCGTGAGTTTG 319730 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 ||||| || || | ||||||||||| | || || ||||||||| ||||||| | | Sbjct 319729 TCAAAGACAACAAAAGCCTTGGAACTTTCAGGCTAGATGGTATTCCTTCTGCTCCACGTG 319670 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | || || ||||||||||| | ||||| ||||||||||| || || ||| |||| | Sbjct 319669 GTGTGCCGCAAATTGAAGTCAAGTTTGACATTGATGCAAACGGGATCCTTTCTGTTGAGG 319610 Query 476172 CTTGTGATAA 476181 ||||||| || Sbjct 319609 CTTGTGACAA 319600 Score = 93.3 bits (102), Expect = 3e-13 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 474653 TTTTCAC-CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCT 474710 |||||| | ||| ||||||| | |||||| | | |||||||| |||| || ||| Sbjct 261905 TTTTCAAGCTGAAGAAATTTCCGCGATGGTTCTCACTAAAATGAAGGAAACTGCTGAGG- 261963 Query 474711 CATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770 |||| || || | || | | | || || | || ||||| || ||||| |||||| Sbjct 261964 CATACCTCGGCAAGGACATCAAGAACGCCGTGGTGACGGTTCCCGCCTATTTCAATGATG 262023 Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830 | || |||||||| || ||||||||||||| || || ||||| || || | | |||| Sbjct 262024 CCCAGCGTCAAGCCACCAAAGATGCGGGAATCATCGCTGGTCTAAACGTGGCAAGAATTA 262083 Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 | || || || || || || ||| | ||||| || |||| Sbjct 262084 TCAACGAGCCTACTGCCGCGGCAATCGCTTACGG-CTTG 262121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178342102960