Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq10 147 6e-30
seq1 93.3 1e-13
>seq10
Length=591496
Score = 147 bits (162), Expect = 6e-30
Identities = 227/315 (72%), Gaps = 12/315 (4%)
Strand=Plus/Minus
Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630
||| ||||| ||||| | |||||| || || ||||||||| |||||| || || ||
Sbjct 222430 GTCCTCCATGGCCTTGACGAGACGACGTTGGATGTAACCAGTTTCAGATGTCTTAACCGC 222371
Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCG--GTCGT 302688
|| ||||| | ||| | ||||||||||| || |||||||| | ||||| || |||
Sbjct 222370 AGTGTCAATCAAACCTTCGCGACCACCCATGGCGTGGAAGAAGAACTCTTGCGGAGTC-A 222312
Query 302689 AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAAC 302745
|||| | || | ||| | || ||||||||||| | ||| || || |||||||
Sbjct 222311 AGCCGCGTAA-GTACGAGTTTTCGACGAAACCACGGGACTCCGGACCGAAATCGTC---T 222256
Query 302746 TTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACG 302805
||| | ||||| |||| ||| | || ||||||| |||||||| || || || |||
Sbjct 222255 TTGCTGAAGTGCGGCAAGGTACGTCCCTTGAAGCCGTACGGGATACGTTTGCCTTCTACG 222196
Query 302806 TTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCAC-TGCCCTTGGAGCC 302864
|| ||||| |||| |||| |||||||| ||||| |||| || ||||| || ||
Sbjct 222195 TTTTGCTGACCCACACACGCGATCATCTGTGAAAT-GTTAAGGAACGAACCCTTCGATCC 222137
Query 302865 AGCATTTACCATAAT 302879
||| ||||||| ||
Sbjct 222136 AGCGGTTACCATCAT 222122
>seq1
Length=1096037
Score = 93.3 bits (102), Expect = 1e-13
Identities = 179/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463
||||| | ||||||||| | || || |||| ||||| ||||| || ||| ||
Sbjct 269687 GCGATCAAACCACACTTCTGGCAGACGTGGATTCTGTACGCATCGGACTGGTCCATCAGA 269628
Query 251464 CGACCCTTGGTGAAGCGAGATG-CACCGTGTGAAATCATACAATCACGCTCCATTTCACC 251522
|| |||| ||| |||| | ||||||| || |||||||| || |||||||| ||
Sbjct 269627 CGTTCCTTCAGGAA-CGAGGCGGCACCGTGACTCATGATACAATCGCGTTCCATTTCTCC 269569
Query 251523 GAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GATTAACCA 251581
|||||| | |||||| || | | | |||||| || ||||| || | |||| |
Sbjct 269568 GAAACGCAAACCACCGTCTCTCGATCGACCCTCCATTGGTTGACGCGTCAAGATTTGT-A 269510
Query 251582 TAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGA 251641
||||||| | ||| || ||| || | ||||| ||||| |||||||| |||
Sbjct 269509 CAGGACCGCGGCCGCGAGAGTGAATCTTGTCGTCGACCATGTGCTTCAGACGCTGATAGT 269450
Query 251642 ATGCGGGACCGATGAAGAT 251660
| | ||||||||||||||
Sbjct 269449 ACGTAGGACCGATGAAGAT 269431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817222846740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |