Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 150 2e-31
seq1 145 7e-30
seq8 109 5e-19
seq7 96.9 3e-15
>seq12
Length=542657
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| || ||||| || |||||||||||||| || || |
Sbjct 189346 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189405
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || || || |||||
Sbjct 189406 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189465
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| ||||| || ||||| ||||| | | || | || || |||
Sbjct 189466 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189525
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || |||||||| |||
Sbjct 189526 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGC 189573
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| || ||||| || |||||||||||||| || || |
Sbjct 189574 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189633
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || || || |||||
Sbjct 189634 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189693
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| ||||| || ||||| ||||| | | || | || || |||
Sbjct 189694 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189753
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || |||||||| |||
Sbjct 189754 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGC 189801
Score = 145 bits (160), Expect = 7e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| || || || || |||||||||||||| || || |
Sbjct 189118 ATGCAAATCTTCGTGAAGACGCTCACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCG 189177
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || || || |||||
Sbjct 189178 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189237
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| ||||| || ||||| ||||| | | || | || || |||
Sbjct 189238 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189297
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || |||||||| |||
Sbjct 189298 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGGC 189345
Score = 89.7 bits (98), Expect = 5e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864
||| || || || ||||| |||||||||||||| ||||| || ||||| |||||| |
Sbjct 188991 AGGGATCCCGCCGGATCAGCAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGATGGTCG 189050
Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924
| || | || || ||||| || ||||| || || || ||||||||| | || |||||
Sbjct 189051 CACTTTGGCCGACTACAACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCG 189110
Query 24925 CGGAGGC 24931
||| |||
Sbjct 189111 CGGTGGC 189117
>seq1
Length=1096037
Score = 145 bits (160), Expect = 7e-30
Identities = 570/884 (64%), Gaps = 27/884 (3%)
Strand=Plus/Minus
Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGG-TCGCTGTATTCGACAATTTCGGC 139139
|| || || | ||||||||| || ||| || ||| ||| |||| || ||||| || |
Sbjct 14731 ATGGAAGCCAAGTTGCACACGGCGGTTTCATCCGGGCTCG-TGTACTCAACAATCTCTGT 14673
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199
||||| || |||||||||| || | |||||||| || || ||||| || ||
Sbjct 14672 GCACAAGTTGGAGGACTTGATCGTGCCGAGGTTTTGTTGGTTAGACTTGCGGTTGCACGC 14613
Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG--AATTTG 139257
||| || | ||||| || || | || || || ||||| | ||| | ||| ||
Sbjct 14612 ATCCTTAAAGAGCATGTATGGGTTACCGGTCTCAACTTGGGACTCGAGGATGGCAAACCA 14553
Query 139258 AACAAGTC---CCTAGCTTGTATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313
|| || ||| | | || || | || | | | || ||| |||||||||||
Sbjct 14552 AAGTTGTTGAGCCTTGATGGTCTTCTTACCC---TTACCCTC--CGCT-TCGTACTTTTC 14499
Query 139314 GTA--GAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGA 139371
|| ||||| |||||| ||||| || |||||| | | | |||| || ||
Sbjct 14498 ATACAGAGTT--TCGAATTCCTCACCCCAGCAGTCAGACAATCCAGGGCACTCGTTCGGG 14441
Query 139372 CACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCAC 139431
||||| | || |||| |||||||||||| ||||||| |||| |||| || |||||
Sbjct 14440 CACATCAACGTCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTCGTTCGTCCAC 14381
Query 139432 AAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACC---CATGTTACGTTTCATG 139488
| || | | || ||||||||| | || ||| ||| | ||||| || |
Sbjct 14380 AGGCCGTAGAACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTTCTTACG---CAAG 14324
Query 139489 TTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTC 139548
| ||| | ||||| | ||| |||||||| || || || |||||||| | || || ||
Sbjct 14323 TCAAGCCAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGCTCCCTTG 14264
Query 139549 CGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGC 139605
|| || |||||||| || |||| || | | | ||||| || |||| ||||||
Sbjct 14263 CGCTTACCACCACCTTGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATCGGA 14204
Query 139606 TCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCA 139665
| ||| ||| ||||||||||||| || ||| | | | |||||||| ||
Sbjct 14203 ATGATGCCGTTCGACGTTCCGTTGGTGCCTCGAATGTAAGAGCTCGTAGCTCGGATATCG 14144
Query 139666 TGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTC 139725
|| | | ||||| || ||| || |||| || || | |||| || | ||
Sbjct 14143 TGGATGGACAAACCGATACCTCCGGCAGATTTTGAAATACACGCGCACTCCTTCAGCGTG 14084
Query 139726 TCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGC 139785
||||| || || ||| || |||| ||| | || ||||| || ||||| |||
Sbjct 14083 TCGTAAATGCCCTCGATGGAATCTTCCTTCATGCAAATCAAGAAGCACGAAGAAAGCTGC 14024
Query 139786 GGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGAC 139845
|| | || || || |||| || || ||||||||| | | | ||| |
Sbjct 14023 GGACGCGGGGTACCAGCGTTGAACAACGTCGGCGACGCGTGCGTCATCCATCGTTCGCTC 13964
Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905
| || | |||||| || || || | | || || | |||||| |||| |||||
Sbjct 13963 AGCATGTGGTACGTATCAATCGCCTTTTCGATGTCGGTCTTGTGGATGCCGATGGAGACA 13904
Query 139906 CGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAT 139949
||||| |||| |||||| || ||| | ||| ||| |||||
Sbjct 13903 CGCATAAGCAAATGTTGCGGACGCTCGACGACCTTGCCGTCGAT 13860
>seq8
Length=717457
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||||||||| || || || || || || ||||| ||||||||||| || || |||||
Sbjct 310506 AAGATCCAAGATAAGGAGGGCATCCCGCCGGATCAGCAACGTTTGATTTTCGCGGGGAAG 310565
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| ||||| | | || | ||||| ||||| |||||||| || || || |||
Sbjct 310566 CAGCTCGAGGACGGCCGCACGTTGGCGGATTACAACATCCAAAAGGAGTCTACGCTCCAC 310625
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| || ||
Sbjct 310626 TTGGTGTTGCGCTTGCGAGGTGG 310648
>seq7
Length=770246
Score = 96.9 bits (106), Expect = 3e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||||||||| || || || || || || ||||| |||||| ||||||| || || ||
Sbjct 134505 AAGATCCAAGATAAGGAGGGGATCCCGCCGGATCAGCAACGTCTGATCTTCGCGGGTAAG 134564
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| | | | | || || ||||| |||||||| || || || |||
Sbjct 134565 CAACTCGAGGACGGCCGCACGCTCGCCGACTACAACATCCAAAAGGAGTCCACGCTCCAC 134624
Query 24908 TTGGTGTTGCGATTGCGCGGAGGCGG 24933
||||||||||| |||||||| || ||
Sbjct 134625 TTGGTGTTGCGCTTGCGCGGGGGTGG 134650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897487525600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |